| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3081 |
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| Symbol | |
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| ID | 4075527 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 49247 |
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| End bp | 51208 |
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| Gene Length | 1962 bp |
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| Protein Length | 653 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638004582 |
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| Product | OmpA/MotB |
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| Protein accession | YP_611317 |
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| Protein GI | 99078059 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCATAT CCTCGTTTCT GATCCCCACC GCCGCCTTTG CCGGTGCAGC CGGTCTTAGC
TTGGTGGTTG CGGGATTCGC GGCGACGGCG CTTGAGAACA ATTCCGAGAT CGTGGTGCGC
CGCACCCTCG ACAAGGCCGG CTTCACCTGG GCCGAGGTTG CGGCGGATGG GCTGCGGGTG
GAACTGTCGG GCGAGGCCCC GGATGAGGCC ACGCGTTTTG CCGCCATTTC CGAGGTCGGC
TCCGTGGTGG ATGCGGCGCG GATCATCGAC CAGATGGAGA TCACCCCCTC CAAAGGGATC
GCCCCGCCCC GGTTCTCCAC CGAGATCCTG CGCAATGACG CGGGCATCTC GATTATCGGT
CTCATTCCAA GCGACAGCGA TCACCGCGCA CTGGTGAAGA AACTCGGCGC AATCCGGGGG
GCGCCGCAAG TCACCGATTT TGTGGAAACC GCAGACTATC CGATGCCAAA GGGCTGGACG
GATGCCATGT CCTACGCCCT GAAGGCGCTG GCCCTGCTGC CACGCACCAA GATCTCGGTC
GAGGCAGGCG CTGTGCAGAT CACCGCCATT GCCGACAGCC CCGAGGCCAA GGAAGAGCTT
GAAACAGAGC TCAACCGGAT GCTGCCGCCG AACGTGCATG TAACGCTCGA CATTGCTGCG
CCGCGCCCGG TGATCTCGCC GTTCACGCTG CGCTATGTTC TTGGCCCCGA GGGCGGGCGC
TTTGATGCCT GCTCTGCCGA GAGCGAAGAA AGCCGCAGCC GTATTCTGGA CGCGGCCCGT
GATGCGGGTT TGGAACGTCA GGCCGATTGC ACCATCGGTC TTGGTGTGCC CTCGGCCAAT
TGGTCGCGCG CGGTCGAAGT CGGGCTTGAG GCACTCACGT CGCTTGAACA GGGCTCGATC
ACCTTCTCCA ACGGCGATGT CACGCTTGTG GCTGCGCAGG GCACGCCCGA GGCGCTTTTC
GATCGGGTCG TGGGCGAGCT TGAGAACGCG CTGCCGCAGG TTTTTGTGCT GCATGCGGTG
CTGCCTGAGC CCGAGGAGAC TACCGCCGAC ATCATCCCGG AATTCACCGC CACCCTCAGC
CCGGAGGGGC AGGTTCAGCT GCGTGGACGT CTGAGCGACA ATGCCCAGAA GCGCACTGTC
GACAGCTATG CCAAAGCCCG CTTTGGCAGC GACACGGTTT ATGTTGCCAC CCGCAATTCG
CCGGATCTGC CCGGCGTCTG GCCGATCCGT GTGCTGGCCG CGCTGGATGC GCTGGCCCAA
CTCGAACGCG GCTCGGTCAC CGTGACCCCC GAATTGGTGG CAGTGCGCGG CATGAGTCAC
GTTGAAAACG CCAGCGCCGA GATTGCCCGC ATGCTCTCGC AGAAATTAGG CGAGGCAGAG
GATTACGACC TCGACATCAC CTTTGAAAAG CCCCCGGAGC CCGAAGACAA GCTGATGGCG
CCGCAACTCT GCGAGGCGGA ACTGGCGGCG ATCCAGCGCG CCGACAAGAT TGCCTTTGAG
CCGGGCTCTG CCACGGTGGC CGCCGACAGT GCGCGCGTGA TCGACAAGAT CGCCAAGCTG
TTGCAGCAGT GTGGCGAAAT TCCTCTTGAG ATCCAGGGCC ACACCGACAG CCAGGGCCGT
GAGGAAATGA ACCAGAACCT GAGCCAGGCA CGGGCGCAAT CGGTCTTGAA CGCTCTGCGC
GCGCGCCGCA TCCTGACCGG GAGCTTTGTG GCGCGCGGCT ATGGCGAGGA CAATCCGATC
GCCAGCAACG ACACCGAAGA GGGCCGCGAG GCCAATCGCA GGATCGAATT CCGCCTGATC
GAAAGCGCTC TGCCACAGGA CGATGCCGAA ACAGCCGAGG CCGAATCCGA CGCGCAATCC
GCAGATGCCG AGGCCGCGCC CGCAGGTGAT GCGGACGCAC AAACGCCTGA AACACCCCCC
GCCGCTGCCG CGGCCCCCGA AGAGGACACC GACGGACAAT GA
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| Protein sequence | MRISSFLIPT AAFAGAAGLS LVVAGFAATA LENNSEIVVR RTLDKAGFTW AEVAADGLRV
ELSGEAPDEA TRFAAISEVG SVVDAARIID QMEITPSKGI APPRFSTEIL RNDAGISIIG
LIPSDSDHRA LVKKLGAIRG APQVTDFVET ADYPMPKGWT DAMSYALKAL ALLPRTKISV
EAGAVQITAI ADSPEAKEEL ETELNRMLPP NVHVTLDIAA PRPVISPFTL RYVLGPEGGR
FDACSAESEE SRSRILDAAR DAGLERQADC TIGLGVPSAN WSRAVEVGLE ALTSLEQGSI
TFSNGDVTLV AAQGTPEALF DRVVGELENA LPQVFVLHAV LPEPEETTAD IIPEFTATLS
PEGQVQLRGR LSDNAQKRTV DSYAKARFGS DTVYVATRNS PDLPGVWPIR VLAALDALAQ
LERGSVTVTP ELVAVRGMSH VENASAEIAR MLSQKLGEAE DYDLDITFEK PPEPEDKLMA
PQLCEAELAA IQRADKIAFE PGSATVAADS ARVIDKIAKL LQQCGEIPLE IQGHTDSQGR
EEMNQNLSQA RAQSVLNALR ARRILTGSFV ARGYGEDNPI ASNDTEEGRE ANRRIEFRLI
ESALPQDDAE TAEAESDAQS ADAEAAPAGD ADAQTPETPP AAAAAPEEDT DGQ
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