| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3033 |
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| Symbol | |
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| ID | 4075738 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 855 |
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| End bp | 1769 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638004534 |
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| Product | excisionase/Xis, DNA-binding |
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| Protein accession | YP_611269 |
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| Protein GI | 99078011 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1910] Periplasmic molybdate-binding protein/domain |
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| TIGRFAM ID | [TIGR01764] DNA binding domain, excisionase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.627333 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCCGCCC CCCAAGCTGA CTGCGACATG ACTGATCTCG ACCTGCCAGA CCACGAATAT
CTCACTGTCC CTGAACTGGC GGAGTTGCTG CGCCTGAAAG AGCGCAAGAT TTATGATCTT
GCCGCCTCCG GAGAGGTCCC CTGTTCGCGC GCGACAGGGA AATTGCTGTT TCCGGCCAAT
GAGATCCGGG AGTGGATCGC GCGGGCCAAA TCCGGCGGCG AGCCAGCCCC GGTACACCGC
CCGCAGATTC TGCTCGGCAG CCATGATCCG CTGCTAGATT GGGCCATCCG GCAGTCGCAA
TCTGGATTGG CCAGCTATGT CGACGGATCC ATGGATGGGC TCGAGCGGTT CTTGCAAGGC
GAAGGGATAG CAGCCGGCCT GCATTTGCGC GACGAAAAAT CCGGCCAATG GAACGTGCCG
ATCGTGGCCC GTATGGCCAC ACGGCAGAAT GCGGTGCTGA TCCATTTTGC CAGCCGCAAA
CGTGGTCTTG TCTATCGCGA TCCGGACCTT GACCTTGCCT CTCTGAACGA GATTTCCAAC
CTGAGATTTG CACCGCGCCA ACCCGGTTCC GGCACGGATC AGCTGTTTCG AGATCTCGCT
GCTGAAGCGC GCCTTGACCT TAAGAAAGTG GATCTTGTCG ATGTGGCGCG CTCCGAAGAT
GAGGCCGTGG AGAGCGTGCG CCGTGGTCTT GCGGATGTCA CCTTTGGTCT CGAGGCCGTC
GCCAAAAGCT ACGGGCTAAA GTTCACCCCA CTCATCGATG AGGAGTTTGC GCTTCTGGTG
GATCGAAAAG CGTGGTTTGA GCCCGCTTTC CAATGTTTTT TGACCTTTTG CCAGACTGAC
GCCCTTGCGC AGCGCGCCGC CGGCATGGGT GGCTACAATG TCAGCGCCCT CGGCCGCGTG
CGCTGGAACG CTTGA
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| Protein sequence | MAAPQADCDM TDLDLPDHEY LTVPELAELL RLKERKIYDL AASGEVPCSR ATGKLLFPAN
EIREWIARAK SGGEPAPVHR PQILLGSHDP LLDWAIRQSQ SGLASYVDGS MDGLERFLQG
EGIAAGLHLR DEKSGQWNVP IVARMATRQN AVLIHFASRK RGLVYRDPDL DLASLNEISN
LRFAPRQPGS GTDQLFRDLA AEARLDLKKV DLVDVARSED EAVESVRRGL ADVTFGLEAV
AKSYGLKFTP LIDEEFALLV DRKAWFEPAF QCFLTFCQTD ALAQRAAGMG GYNVSALGRV
RWNA
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