| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3864 |
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| Symbol | |
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| ID | 4074927 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008042 |
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| Strand | - |
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| Start bp | 116076 |
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| End bp | 116963 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 638004521 |
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| Product | 2-keto-3-deoxygluconate kinase |
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| Protein accession | YP_611256 |
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| Protein GI | 99077997 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0524] Sugar kinases, ribokinase family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 54 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0735701 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACGGA TTGTCGTTAT CGGAGAATGC ATGGTTGAGA TGGCTCCCGT TGACGGCGGG
CTTTATCGCA TGGGGTTTGC AGGCGATACC TTCAACATGG CATGGCACCT GAGATACCTA
CTGGGTTCGG ATCATTGCGT CGACTATCTG AGCGCCGTGG GTGACGATAG CACATCGAAT
GCGATGTTGG ATTTCATCCA GTCGCAGGGA GTTGGAATCG CCCACATTCG CCAGATTGCT
GGTATGACTA CGGGCTTATA CTTGATCCGG CAAGAAAACG GCGATCGTGC CTTTAGCTAT
TGGAGAGAAA CATCTGCTGC GCGGCAGCTC GCTGATGATC CAGCAGCCTT GGCACGAGCC
TTGCAAGAGG CCGATTTGGT CTGCCTGTCC GGTATTACAC TAGCCATTCT ATCACCCAAG
GCGCGCGAAG TACTTTGGGC GGCAATTACA GAATCTGGTG CGCAGGTTGC TTTTGATCCC
AACATCAGAC CAACACTGTG GAGTAGCCAA GAAGACTGTC GTGCTGCTCT GACGTATGCG
GCGGTGCGAT CTGATGTGAT CTTGCCCAGC TTTGACGACG ATGCTGCGCT GTTTGGGGAT
GTCGCGCCTC AAGCGACGGT GGCGCGTTAC ACACGCCTCG GTGTAGGGGA GGTCGTGGTG
AAAGATGCAG CGCGTCCTGC GATCTATTCC GGCTCTGACG GCACTTTAGA AATCGCCGCC
GACAGACTGG CGGTGCCCGT TGTTGACGCG ACGGGTGCGG GTGACTCTTT TAATGCGGCA
TGGCTCGCCG CTCGCTTGCA GGGCGCTGCA CCCAAAGAGG CCTTGATTGC TGCGCACAAG
CATGCGGCGT GCGTTTTGCA AGTGTCCGGA GCGTTGCTCG TTTCGTAA
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| Protein sequence | MTRIVVIGEC MVEMAPVDGG LYRMGFAGDT FNMAWHLRYL LGSDHCVDYL SAVGDDSTSN
AMLDFIQSQG VGIAHIRQIA GMTTGLYLIR QENGDRAFSY WRETSAARQL ADDPAALARA
LQEADLVCLS GITLAILSPK AREVLWAAIT ESGAQVAFDP NIRPTLWSSQ EDCRAALTYA
AVRSDVILPS FDDDAALFGD VAPQATVARY TRLGVGEVVV KDAARPAIYS GSDGTLEIAA
DRLAVPVVDA TGAGDSFNAA WLAARLQGAA PKEALIAAHK HAACVLQVSG ALLVS
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