| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3863 |
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| Symbol | |
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| ID | 4074926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008042 |
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| Strand | - |
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| Start bp | 115225 |
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| End bp | 115773 |
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| Gene Length | 549 bp |
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| Protein Length | 182 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638004520 |
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| Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
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| Protein accession | YP_611255 |
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| Protein GI | 99077996 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
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| TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 68 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.233303 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGGTCG AAGATACAAA ACTCTCTGGT GTGAAAATCC TGACACCGGC GCGGTTTGGT
GATGCGCGCG GTTTTTTTTC CGAGAGCTGG AACCGCAAGC GCATGGCTGA ACATGGCCTC
GATCTGGAGT TTGTGCAGGA CAACCACTCC ATGTCCGCCG ATGTCGGCAC TATTCGCGGT
CTTCATTTCC AGGCCCCGCC CCATGCCCAG GACAAGCTTG TGCGCTGTGG GCAGGGGGTG
CTGTTTGACG TGGTGGTCGA TATCCGCAAC GGCTCGCCCA CTTATGGAGA ATGGATCGGA
GTGGAGCTTT CGGCCGAAAA TGGCCGCCAA CTCCTGGTGC CCAAAGGTTT TTTGCACGGG
TTCATCACCC GCGCGCCGAT GACCGAGATC ATCTATAAAT GCACCGATTA CTACGCGCCC
GAGTGCGACG GGGGGGTGCG CTGGGACAGC TGCGGGATTG ATTGGGGCTT TGATGGCCAG
CCGATCCTGT CGGAAAAAGA TGCCGCCGCG CCCAAGTTTG CGGATTTGCA AAGCCCCTTC
GTATTCTGA
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| Protein sequence | MKVEDTKLSG VKILTPARFG DARGFFSESW NRKRMAEHGL DLEFVQDNHS MSADVGTIRG
LHFQAPPHAQ DKLVRCGQGV LFDVVVDIRN GSPTYGEWIG VELSAENGRQ LLVPKGFLHG
FITRAPMTEI IYKCTDYYAP ECDGGVRWDS CGIDWGFDGQ PILSEKDAAA PKFADLQSPF
VF
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