Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_3861 |
Symbol | |
ID | 4074924 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008042 |
Strand | - |
Start bp | 112986 |
End bp | 114038 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 638004518 |
Product | dTDP-glucose 4,6-dehydratase |
Protein accession | YP_611253 |
Protein GI | 99077994 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1088] dTDP-D-glucose 4,6-dehydratase |
TIGRFAM ID | [TIGR01181] dTDP-glucose 4,6-dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 62 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.646368 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATAC TGGTGACGGG CGGTGCGGGC TTTATCGGCT CTGCGGTGGT GCGCCAAGCG ATTGCGGCAG GCCATGAGGT GGTCAACTTG GATGCGCTGA CCTATGCGGC CTGTCTGGAC AATGTCGCCA GCGTCGCCGA GAGCCCGTCT TATGTCTTTG AAGAGGCCGA CATTCGCGAT CGTGCCGCAT TGGACCGGAT CTTTGCCGAA CATGCACCGG ATGCTGTGAT GCATCTGGCC GCCGAGAGCC ATGTGGATCG TTCCATTGAT GGGCCCGGTG ATTTTATCGA GACAAATGTG ACCGGTACCT TCAACATGCT TGAAGCTGCG CGCAAGTTCT GGATCGCGGT GGGAAAACCT GCGCGGTTTC GCTTCCATCA TATCTCGACC GATGAGGTCT ATGGCAGCCT GCCGACCGAC AAATCGGTGA TGTTCACGGA AGAGACCGCC TATGATCCGC GCTCGCCCTA TTCGGCCTCC AAAGCCTCGA GCGACCATCT GGTGCGCGCC TGGCATGAGA CCTATGGGCT GCCGGTGGTG CTGACCAATT GCTCCAACAA CTACGGCCCC TTCCATTTCC CCGAAAAGCT CATCCCGGTG GTGATTTTGA ATGCGCTCGC CGGTAAGGCC CTGCCGATCT ATGGCGATGG GTCCAACATT CGCGACTGGC TCTATGTGGA AGATCACGCC GATGCGCTGT TGCTGGTGCT GCAGAAGGGC GAAAACGGGC GCAGCTATAA TGTGGGCGGC GAAAATGAGC GCACCAACCT TGAGCTGGTG GAAACGCTTT GTGCGATCCT TGATGACAAG CGCCCGCGCG AGGATGGGAC ATCCTATAAG GAGCAGATCA CCTTTGTGAC GGATCGCCCC GGCCATGATG CACGCTATGC GATTGATCCT TCTCGTATTC GCACCGAGCT GGGCTGGCGC CCCTCGGTAA CTGTCGAGGA AGGTTTGGCG AAAACGGTGC AATGGTATCT CGACAATGAG GATTGGTGGC GTGCTCTGCA GTCCCGCAAG GGCGTGGGCG AGCGTCTGGG TGTTCAGACA TAA
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Protein sequence | MKILVTGGAG FIGSAVVRQA IAAGHEVVNL DALTYAACLD NVASVAESPS YVFEEADIRD RAALDRIFAE HAPDAVMHLA AESHVDRSID GPGDFIETNV TGTFNMLEAA RKFWIAVGKP ARFRFHHIST DEVYGSLPTD KSVMFTEETA YDPRSPYSAS KASSDHLVRA WHETYGLPVV LTNCSNNYGP FHFPEKLIPV VILNALAGKA LPIYGDGSNI RDWLYVEDHA DALLLVLQKG ENGRSYNVGG ENERTNLELV ETLCAILDDK RPREDGTSYK EQITFVTDRP GHDARYAIDP SRIRTELGWR PSVTVEEGLA KTVQWYLDNE DWWRALQSRK GVGERLGVQT
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