| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3857 |
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| Symbol | |
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| ID | 4074920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008042 |
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| Strand | + |
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| Start bp | 109117 |
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| End bp | 109884 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638004514 |
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| Product | hypothetical protein |
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| Protein accession | YP_611249 |
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| Protein GI | 99077990 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 59 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.999205 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCTTC GTAGTTTTTT TGCCCTGATC ACCTGTATCG GCACCCTGTG CTCTGCTCCC
GTTTGGGCCG AGACCATCCG TCTGGTTCAA GATGAAGCCT ACGCCCCCTA TATGACCAAG
GATGGCAAAC AACCCACCGG CATCTGGGCC GAGGTGATCA CCCAGGCCCT GAGCCGCATC
GAGGGCGATT ATGACGTGGT GCTGGAAGCT GTGCCGTGGT CGCGCGCTGT AAACCTGGTG
GAGAGCGGGC AGGCCCATGG GCTTGTTGGC ACCTATTACA AACCCGACAG CCGCCCCTGG
ATCGGCACCT ATTCAACCGC CCCCTTCACC GAAAATGTCG CGGTCTACTG CCGGGATGGG
GTTGCTGAGG CGGGCTGGTC CTATCCGCAG GATTTCAAAG GACTCACATT TGGCAATAAC
GCCGGCTTTG GCACGCCGGG GCAGGCGTTC TTTGATCTGG TCGCCAGTGG TCTCATCTCG
CTTCAGGAAG CGCCGACCAC CGATCTCAAC CTGAAGAAAC TCGCCGCGGG CCGCATTGAT
TGCTACGTGC AAGAGCAGCT GACCGCAGAA ATCGCCATCA CCGCGCTGGG GATCAGTGGC
ATCACCCAGG TGCTTGATAC CTCGGTCGAA AACAGCATGA TCGGCTTTCG CGCCAGCTGG
CAGGGCGCCG AGGCGGAAGG CTTCATCGCC GAAATGGATC GCGCCCTTGC CGAGATGATG
GCGGATGGAA CGATCGACCA GATCATCGCC ACCGCGGTTG CCGGTTAA
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| Protein sequence | MPLRSFFALI TCIGTLCSAP VWAETIRLVQ DEAYAPYMTK DGKQPTGIWA EVITQALSRI
EGDYDVVLEA VPWSRAVNLV ESGQAHGLVG TYYKPDSRPW IGTYSTAPFT ENVAVYCRDG
VAEAGWSYPQ DFKGLTFGNN AGFGTPGQAF FDLVASGLIS LQEAPTTDLN LKKLAAGRID
CYVQEQLTAE IAITALGISG ITQVLDTSVE NSMIGFRASW QGAEAEGFIA EMDRALAEMM
ADGTIDQIIA TAVAG
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