Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_3850 |
Symbol | |
ID | 4074913 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008042 |
Strand | - |
Start bp | 102774 |
End bp | 103088 |
Gene Length | 315 bp |
Protein Length | 104 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 638004507 |
Product | hypothetical protein |
Protein accession | YP_611242 |
Protein GI | 99077983 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 55 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.540932 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAACCT GCCTTGTGTG CGTTGACATG TTCCCTTGGC CTACCCTCTT GCGGTCTTTC TTACATAACA AGGGGCTGTA TTTGGGTATT CCGGTTTCTG CTCTGTCGCA AGCGCGGGGC ACATGCGTTT TCTGCTGCCC TAAGTTCGTT TTAGTTTGCA CTGTCGTCGA TCGGGAGACT TACCTCGTTG CAGATGTGGT GCCGCGTCTC ATGCTTCACT CTTATGCCCT TGCGGGCCAT GACCCAGCGG CAGTTGAACC AGCCTCGATT AGCCGCAGTT CACGGCATCG TCTTACGCGT CCTAGCACAG TCTGA
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Protein sequence | MPTCLVCVDM FPWPTLLRSF LHNKGLYLGI PVSALSQARG TCVFCCPKFV LVCTVVDRET YLVADVVPRL MLHSYALAGH DPAAVEPASI SRSSRHRLTR PSTV
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