Gene TM1040_3850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_3850 
Symbol 
ID4074913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008042 
Strand
Start bp102774 
End bp103088 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content55% 
IMG OID638004507 
Producthypothetical protein 
Protein accessionYP_611242 
Protein GI99077983 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones55 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.540932 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAACCT GCCTTGTGTG CGTTGACATG TTCCCTTGGC CTACCCTCTT GCGGTCTTTC 
TTACATAACA AGGGGCTGTA TTTGGGTATT CCGGTTTCTG CTCTGTCGCA AGCGCGGGGC
ACATGCGTTT TCTGCTGCCC TAAGTTCGTT TTAGTTTGCA CTGTCGTCGA TCGGGAGACT
TACCTCGTTG CAGATGTGGT GCCGCGTCTC ATGCTTCACT CTTATGCCCT TGCGGGCCAT
GACCCAGCGG CAGTTGAACC AGCCTCGATT AGCCGCAGTT CACGGCATCG TCTTACGCGT
CCTAGCACAG TCTGA
 
Protein sequence
MPTCLVCVDM FPWPTLLRSF LHNKGLYLGI PVSALSQARG TCVFCCPKFV LVCTVVDRET 
YLVADVVPRL MLHSYALAGH DPAAVEPASI SRSSRHRLTR PSTV