Gene TM1040_3836 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_3836 
Symbol 
ID4074900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008042 
Strand
Start bp83259 
End bp83615 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content60% 
IMG OID638004494 
Producthypothetical protein 
Protein accessionYP_611229 
Protein GI99077970 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value0.318271 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0637146 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTCGAT GCACCGGCGG GATACGGGCC GCACAAGACG CTCTACAACC GTTGGAGGCG 
GTGGAGCGGA AGGGGCATCT TCGGGCAGAT GATGGCCGGT CACGCCATGC TAACATGTGC
GTGCTTGCTG AGCATTCCGG CGTCAGCCGC GCCAGGAACT TCAAGATCAT CCGGGGGAAG
ATTTGGCGCT TTACCACAAC CATTAATGCG CCCCAGTCCT GTGAACCGCA GAATCAGATG
ATGGGTCTCA CGAAGAAAGC TCGCGCCGCA CGCGCCGCGC GTTATCGAAC AACCCCAGAA
GTCCGCGCCT TAATCCGGCG AAGTGAGATG CCCTTGCTCG CTAACGCCGA TCTCTGA
 
Protein sequence
MCRCTGGIRA AQDALQPLEA VERKGHLRAD DGRSRHANMC VLAEHSGVSR ARNFKIIRGK 
IWRFTTTINA PQSCEPQNQM MGLTKKARAA RAARYRTTPE VRALIRRSEM PLLANADL