| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3832 |
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| Symbol | |
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| ID | 4074982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008042 |
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| Strand | + |
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| Start bp | 76954 |
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| End bp | 78234 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638004490 |
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| Product | glycosyl transferase, group 1 |
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| Protein accession | YP_611225 |
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| Protein GI | 99077966 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0438] Glycosyltransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 0.175097 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.13882 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAGCC CAAACACTAT GGTAAAGCCG CAGATTGTTT TTGACTTAAC GGAAGTCCTT
TTGGCTTCGA CTGGTAAACT TAGGTATTAT GGCATTGCAC GCGTAGCTGC AGAAGCTGGT
ATCGCGCTTC GGAAGCTGGA CGCGTCCATT CGGTTCGCTG TCTTCTCGCA GGGCCACCGG
GGACTACTTG AGGTCTTTCC GGAAATACGC GAAGACGGCA GTGTAGAGCT AAACGTTCCT
GCGGGCATTC GGCAAATTCG TATGCGCAGC CATCACTATA GCAGGTCGAA GCTTAGAGAC
CTTATTCTGT CAGCAATTCG ACCGCTGATC GACCGGAAAA ATCGGTTGTT TTGGGATGAG
ATTGCGCCTG GAATGCCTCA AATAGAGATG GCGGGTAAGA CGTTTGTCAC CTGCTCCCGC
CCCAAAGTGA TCACTGAAAT TTTGTGCGCT ATGGCGAAAC AAGGCGTGTC ATGTGACGTC
ATCCCAATGT TGCATGACAT GATACCCCTG CATGATTTTC ATCATCAAAG GGCAAGCTTT
CCGAAGAACT TTGTCGGCGA CAACAGGTTC GTCATCGAGA GGGCAAAAGG CCTCTTGTCA
GTATCCGAGT TTACGCGCCA AGAAATTATA GATTTTTCGC AGAGCGATGT GTTGCCGGCA
GTGCCCGAAA TCATTGCCGT CCCCCTGGTA CATCAGTGCC CGATAGGGAC AGAACCCGCA
GAGCAAGCTC CCCCCGATAC TCCATATATT TTGACTGTCG GCTCAATGCT GGGCCGTAAG
AACTTAGACG TTGTGTTCGA AGCTTTGCGT GTGTTACAGA GAACAGGTAG CCCATTGCCG
AAACTGGTTT TGGCCGGTGC GCCTAGGGGG CGCACACGAA CTTATGTCGC AAGTGCGGAA
TGTGATAGCA TTCGGGATCT GGTGCTCTTT TACGAGAACC CAAATCAAAC TGATCTCGTA
ACCCTTTATG AAAACGCCAC AGCGGTCATT ATGCCAAGCC GCATGGAAGG GTGGGGTTTG
CCAGCGGGAG AGGCTCTCTG GTGTGGCACA CCTGCTATAT GCTCTACGGC TCCTGTGCTT
GAAGAAGTTT GCGGCGATTT AGGGTTGTAC TTTGATCCTG ACGCAGCAGA TGAACTGGCA
GAATACATTC GCCGCCTACT CACGGATTCT GCGTTTTCGA CGAAGTTGCG CATGCGTATT
TCAGAGCACA AGTCCAAATT GCGAACCTGG GATAATGTAG CCGAAGATAT CGTAGCTGCG
GTATCTCGCC TCTCGCGCTA A
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| Protein sequence | MSSPNTMVKP QIVFDLTEVL LASTGKLRYY GIARVAAEAG IALRKLDASI RFAVFSQGHR
GLLEVFPEIR EDGSVELNVP AGIRQIRMRS HHYSRSKLRD LILSAIRPLI DRKNRLFWDE
IAPGMPQIEM AGKTFVTCSR PKVITEILCA MAKQGVSCDV IPMLHDMIPL HDFHHQRASF
PKNFVGDNRF VIERAKGLLS VSEFTRQEII DFSQSDVLPA VPEIIAVPLV HQCPIGTEPA
EQAPPDTPYI LTVGSMLGRK NLDVVFEALR VLQRTGSPLP KLVLAGAPRG RTRTYVASAE
CDSIRDLVLF YENPNQTDLV TLYENATAVI MPSRMEGWGL PAGEALWCGT PAICSTAPVL
EEVCGDLGLY FDPDAADELA EYIRRLLTDS AFSTKLRMRI SEHKSKLRTW DNVAEDIVAA
VSRLSR
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