| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3830 |
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| Symbol | |
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| ID | 4074981 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008042 |
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| Strand | - |
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| Start bp | 75610 |
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| End bp | 76341 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638004489 |
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| Product | hypothetical protein |
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| Protein accession | YP_611224 |
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| Protein GI | 99077965 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01168] Gram-positive signal peptide, YSIRK family |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 0.110021 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.226423 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTATGCTG GACTCCTGTC ACGGAGGTTT CGCAGCATGC ACTATCTGAT CAAGAAGCTC
CTCCCCTCGG TCGCAGTCGC TTTGACCGTG ACTGGTCTTT CGCTGCCGAC GCCCGCACGC
GCGCAGACCT ATCCGATCGA CTGCGCGATC CTCTTGTGTC TGTCTGGCGG TTGGCCGGCT
TCAGTACCAT GCGCCCGGGC TCGCGCCGAA TTCATTCGGC GGATTACCCC TTGGCCGGTG
GAACCGCCAC TGCAGATCTG GCGCTGTCCC ATGGGCGCCT CCTATGAGAG CGATCGGCAA
TCAAACAACG CTGGCCGCAT CTTTGAAGCC TTGTACCGAC CCGATAGCCG TCAACCGCTC
CAATCCTTAC GAGTCGACGA TGTCATTCCC ACTGACCGAG CCCTCCGGCT CGTTCAAGAT
CGCGCGGACA TCGATATCAG TGGACCTGAG TTCAATTTCG TGCGGTCCAT CCGCATCTTT
GATGTTCGCT ATGCCCGGCA GCACGAATCT GGACGTAACA GCGACTGCAA CCGTAGCGCC
ACCGTGGTCC TCGGCACCTA TGGGATCCAA GGCGATTTTT CCTGGCAACG ATCTTCAATA
ACTGCCCTGC CGGAGGCCCA TGTCGGTCTT GAACGTTGGG GCCAGAATTG CCCGGGTATC
TACCACCGAT CTGTCTTCGT CGATTGGCGT GACTATGAGG GCAATTACGG GTTTGAGCAG
GTGAACTACT AA
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| Protein sequence | MYAGLLSRRF RSMHYLIKKL LPSVAVALTV TGLSLPTPAR AQTYPIDCAI LLCLSGGWPA
SVPCARARAE FIRRITPWPV EPPLQIWRCP MGASYESDRQ SNNAGRIFEA LYRPDSRQPL
QSLRVDDVIP TDRALRLVQD RADIDISGPE FNFVRSIRIF DVRYARQHES GRNSDCNRSA
TVVLGTYGIQ GDFSWQRSSI TALPEAHVGL ERWGQNCPGI YHRSVFVDWR DYEGNYGFEQ
VNY
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