Gene TM1040_3807 details

Gene Information

• Locus tag: TM1040_3807
• ID: 4074958
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ruegeria sp. TM1040
• Kingdom: Bacteria
• Replicon accession: NC_008042
• Strand: +
• Start bp: 58658
• End bp: 59440
• Gene Length: 783 bp
• Protein Length: 260 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 638004466
• Product: hypothetical protein
• Protein accession: YP_611201
• Protein GI: 99077942

Plasmid Coverage information

• Num covering plasmid clones: 62
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 14
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCTTTCA ATCGGGCTCT TGCGACAACC GTCGCATTGA TATTGTCGCA TAGCGCAGTG 
TCTGCCGCAG ATCTGGCAAT TATCGGTGGT GCTAACTTCT CCCAGTCCTC CGCACAAATC 
CGCGCAACTT TTGAGGCGGA GGGCTATCGC TGTGAACGCA TGGGCGTCAT GGATCCTGAC 
GATGGAAAAC TCGATGAAAA AGGCTGCGCA CTTTGGAAGG ACGAGTTTTC CTTTTCTAGC 
TCGGATACGC GCGTGATGTG GACGATGCGC TATCAAAAAG ACAACGAGAT GCGGATCCTC 
GTCCTTGGAG AGCAGCAAGG CCTGGATCGC GTGTTGATGC TTGGCCAGGC CACGTTTTTC 
GAAGATGCGG CTATCGAGAT GTCCTCCTCG GAATTCCTAG AGGATAGGCT TGCTGTATTC 
TTCGAGGTCA CACCGACATT CGGCACCTTC GATACCTCTG AGGATGCGTT AGATCTGTGC 
TTCCTGATGA CGGAGGATAT AACTGTCCTG ACCCCTGCGG GCTTGCCGAG TTCTGCATTG 
GAGGAAAACC AGAGGTTTCT TGGCTCTCCA ATCAGTCCGG CAGCCATCCT CTGCGAACGT 
TGGATGAACC GGAAACGCGA TGCGGTTGTC GATTTTGCCC GATCAGATGC AGGTCCAGCT 
TATGCGCGTA AGGTCGTGTA TTACGCCGAC GGCGGTAAAC CTCAACAGTA CATGGACATG 
CTGTGGAATG TTCCGGCAGT GGTGGGTTGG AGCCTAGCCC CCCTTCAGGT CGAGGGTAAA 
TAG 

 

Protein sequence

MAFNRALATT VALILSHSAV SAADLAIIGG ANFSQSSAQI RATFEAEGYR CERMGVMDPD 
DGKLDEKGCA LWKDEFSFSS SDTRVMWTMR YQKDNEMRIL VLGEQQGLDR VLMLGQATFF 
EDAAIEMSSS EFLEDRLAVF FEVTPTFGTF DTSEDALDLC FLMTEDITVL TPAGLPSSAL 
EENQRFLGSP ISPAAILCER WMNRKRDAVV DFARSDAGPA YARKVVYYAD GGKPQQYMDM 
LWNVPAVVGW SLAPLQVEGK