Gene TM1040_3803 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_3803 
Symbol 
ID4074954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008042 
Strand
Start bp55589 
End bp56197 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content55% 
IMG OID638004462 
Producthypothetical protein 
Protein accessionYP_611197 
Protein GI99077938 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value0.9624 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGCGCG TGGTTCCATT TGCCTCAAGC CAGGCACATG CCCCGCGCTT GTTTAAGGAG 
ATGACGATGA AAGCACTGGT TCTAACTGCA GCCCTTACCT GCACTGCGGG CACTGCAAGT
GCCTTGTGTG AGGACGCGTG GTATTTGCGG AATATGGCCT TCGACAGAGC AGGTTATTGC
TTTGGCTCTG CCCTGGGTAA GTCGGTTTTT AGTGCAGAGT GTTCGACGAA ATCTCCCAGC
CTGAATGACT GGGATCAGCG AATGGTCAGC GCACATAAAC AATTAGAAGC CAGCTATAGC
TGCAAGATTA ATACCAAAGG TCGCCATTTG GCCTCTTCGT TGGTCGGAAA GCTGGATGAT
ATCGACCTCT TGCCGACGCT GTCACAGTTT GAATCCTCCT GTGTCGGCTA CACGGGCGCA
CCGGTTACCC TGACCAGCGG CATTGGCATG CGTGACAGCT ATCCGACAGG CACCATACAA
GGCGGCGCTA CGGTACACTT TCGTTTTGAA CCATGGGGTG GGTTTGAGTT CGTCGAGACG
GAGACAGGGG CGGGGTGGAT TCCCGAAGGA TCGGTCACCC CCGATGTCTG CACTGCTTTT
GCAGGGTGA
 
Protein sequence
MWRVVPFASS QAHAPRLFKE MTMKALVLTA ALTCTAGTAS ALCEDAWYLR NMAFDRAGYC 
FGSALGKSVF SAECSTKSPS LNDWDQRMVS AHKQLEASYS CKINTKGRHL ASSLVGKLDD
IDLLPTLSQF ESSCVGYTGA PVTLTSGIGM RDSYPTGTIQ GGATVHFRFE PWGGFEFVET
ETGAGWIPEG SVTPDVCTAF AG