Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_3803 |
Symbol | |
ID | 4074954 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008042 |
Strand | + |
Start bp | 55589 |
End bp | 56197 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 638004462 |
Product | hypothetical protein |
Protein accession | YP_611197 |
Protein GI | 99077938 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 0.9624 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGCGCG TGGTTCCATT TGCCTCAAGC CAGGCACATG CCCCGCGCTT GTTTAAGGAG ATGACGATGA AAGCACTGGT TCTAACTGCA GCCCTTACCT GCACTGCGGG CACTGCAAGT GCCTTGTGTG AGGACGCGTG GTATTTGCGG AATATGGCCT TCGACAGAGC AGGTTATTGC TTTGGCTCTG CCCTGGGTAA GTCGGTTTTT AGTGCAGAGT GTTCGACGAA ATCTCCCAGC CTGAATGACT GGGATCAGCG AATGGTCAGC GCACATAAAC AATTAGAAGC CAGCTATAGC TGCAAGATTA ATACCAAAGG TCGCCATTTG GCCTCTTCGT TGGTCGGAAA GCTGGATGAT ATCGACCTCT TGCCGACGCT GTCACAGTTT GAATCCTCCT GTGTCGGCTA CACGGGCGCA CCGGTTACCC TGACCAGCGG CATTGGCATG CGTGACAGCT ATCCGACAGG CACCATACAA GGCGGCGCTA CGGTACACTT TCGTTTTGAA CCATGGGGTG GGTTTGAGTT CGTCGAGACG GAGACAGGGG CGGGGTGGAT TCCCGAAGGA TCGGTCACCC CCGATGTCTG CACTGCTTTT GCAGGGTGA
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Protein sequence | MWRVVPFASS QAHAPRLFKE MTMKALVLTA ALTCTAGTAS ALCEDAWYLR NMAFDRAGYC FGSALGKSVF SAECSTKSPS LNDWDQRMVS AHKQLEASYS CKINTKGRHL ASSLVGKLDD IDLLPTLSQF ESSCVGYTGA PVTLTSGIGM RDSYPTGTIQ GGATVHFRFE PWGGFEFVET ETGAGWIPEG SVTPDVCTAF AG
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