Gene TM1040_3801 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_3801 
Symbol 
ID4074952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008042 
Strand
Start bp54278 
End bp54745 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content59% 
IMG OID638004460 
Producthypothetical protein 
Protein accessionYP_611195 
Protein GI99077936 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value0.877073 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAGA TATACCTTTC GATTGCGCTG ATGTTTGGCG CTGGCGCGCT TCAAGCCGGG 
CAATTCTGCG AACTTGACGG CACCGAAATG TTCACCTGCA CGCTGAAGGG CGGCACGCGG
GGTGTCGAGG TCTGCAACGC GGTCTGGGCA GATGGCACCA AGGCTGCCTA CGGGTTCTTC
AAATCCAACG GCGCAGTGGA AAAAGAGATC CTGCAGGACA TGGCCACGAT CACCGCATCG
CCCTGGAACG GCATGGGGAA CTTCATGACC GAGTCCGTGA CCTTTGATGC TGGCGGTGGC
TACGCCTATG AGGTCTGGTG GGGCAGCGAA CGCGCGGCAG ATGCCACCGA AATGGGCGGG
GTCAATGTTC TGAAAGACGG CGCGCTGATC GCTGATATTC CCTGTGACGC TGGCAGCGTA
AACAGCGACC TGTCTTCGCT CATCGAGCTG ATCGAAGCGG CGCAGTAA
 
Protein sequence
MKQIYLSIAL MFGAGALQAG QFCELDGTEM FTCTLKGGTR GVEVCNAVWA DGTKAAYGFF 
KSNGAVEKEI LQDMATITAS PWNGMGNFMT ESVTFDAGGG YAYEVWWGSE RAADATEMGG
VNVLKDGALI ADIPCDAGSV NSDLSSLIEL IEAAQ