| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3797 |
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| Symbol | |
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| ID | 4074948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008042 |
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| Strand | + |
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| Start bp | 49911 |
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| End bp | 51461 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638004456 |
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| Product | hypothetical protein |
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| Protein accession | YP_611191 |
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| Protein GI | 99077932 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.134421 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCCCTG GGACGGTTTA TGTAGACCGG CCGGGAACTG GAATTTTTGC AGTCGAATTA
GGGCCTAGCG GGGCCGGAGC GCTGCTGAAT GAACGCGGCA AACGCGAGCT TGAGATGGTT
TCATATGGTC CACGCCAGAT TTGTCTTCAG GAGGAATGTG TCAATGTGCA GATCGAAGAT
GATCGACTTG CGCTTTATAA GGACAACAGT GACCGGCTCG AGGGTTTTCT GATCTATATT
GCCCTCGGGC GTTTTACGTC ACCGCTTCCG CTTGCACCTG TTAAGGACGC GCAGCAATCA
CAAGAGATAG CTAACGTTGA CGTTTCAAAT GCGGAAGCTA AGCTGGATAT CTACGACACA
GCGGAGTCCA CAGGCAAGGC AATGGACGAA GCTCTTGCCA GCGAAGCCTG CACTGATGGG
GCTTTGTTTT ATGGTACTAG TGACTGTAAA GCAGCGATGG AACGGGCGGT TTCACAAGAC
ATTGGGCGGA TCGTATCCTC TGCGACGGGG CCAACAAATG CAGAGAACGA AAGCCAACCG
GTACTAGATT TGCCCGAAGT AGAATACCTA TGGTTCGGCC GCTCGGCTGA TCTGCAGGTC
CAAAAGCTCG GTACGCGGGA TAAACGCGGA CAAACACGTG TGGATTTTGA AAACGGATCC
CCACGGATCG GTGGGCGTAT ACTTATACCC TCATTTGTAC CTGACAGTGC ACGCATCGTG
GCGGTAAGCG AAGCGTTGGC CTTAATTCGT TTTTCGGGCT CATTATTGCC CAAAGGGTGT
GTTGAAGCAT ACCGCTGGCT TTGGGTTCAG GCATCTGACC ACGGTGTTCT GTCAGAGCCG
TTTGGAGCCT GTACCGCTGC GGAGGATGTC GAGGTACATT ACGAGGGATC TCGGGTCGTG
ACGACTATCA CTCCTGAAGA GGGTATTCCG AGTACCTTCG AAATATTCCC ATACCGAAGT
GACGACATTG ATCCATTGCG GGTATCCGTC ACTTCGGGTC CGTCTGTCGA TTTTGAGCCC
GTGTCTGAAG AAGATTGGAA AACCATTGAG CGCCGTGCAG CAGAGGCACA ACGCATCGCT
ACCGCCGAAG CGGCGAAAGA AGAAGCTCAG ATCCGAGAGG CGGATATGCA AGCCGAAAAA
GAAGCTGCCC TTGCTAGAAG GCGCCAACCT GCAACCCCCA CCGGGAAGCT CGACGATGGA
AATGTCTTTG ACATCCTCGC TCAGGATTCA GTGCAGTCAG CGATTGCTGC CTCCGACGAT
GCAAAAATTA TCCAAAAAGC TTTATCAGAT CGTTTCTATG AGACTGTCTA TCTACCGCAC
AACAAGCACG TTGGTGACAT TTACGTCGGA CTTTCCTGCG GCCCATCGGG ATGCGCCGAA
CTGATGGCTG GCGCTATATA CAATCGAGTC ACGCAAGACG CCTTCGGGTT TGTACAGATC
GACTTTGAAA CTTACAGGTT TGGATCAGAA GGTTGGCTTA TGGCGGACCC TTCGGCGCAG
GTTGTGACAG ATACCTTGAG CAAAATGGTC AAAGCTATTC CCGCTGAGTA G
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| Protein sequence | MLPGTVYVDR PGTGIFAVEL GPSGAGALLN ERGKRELEMV SYGPRQICLQ EECVNVQIED
DRLALYKDNS DRLEGFLIYI ALGRFTSPLP LAPVKDAQQS QEIANVDVSN AEAKLDIYDT
AESTGKAMDE ALASEACTDG ALFYGTSDCK AAMERAVSQD IGRIVSSATG PTNAENESQP
VLDLPEVEYL WFGRSADLQV QKLGTRDKRG QTRVDFENGS PRIGGRILIP SFVPDSARIV
AVSEALALIR FSGSLLPKGC VEAYRWLWVQ ASDHGVLSEP FGACTAAEDV EVHYEGSRVV
TTITPEEGIP STFEIFPYRS DDIDPLRVSV TSGPSVDFEP VSEEDWKTIE RRAAEAQRIA
TAEAAKEEAQ IREADMQAEK EAALARRRQP ATPTGKLDDG NVFDILAQDS VQSAIAASDD
AKIIQKALSD RFYETVYLPH NKHVGDIYVG LSCGPSGCAE LMAGAIYNRV TQDAFGFVQI
DFETYRFGSE GWLMADPSAQ VVTDTLSKMV KAIPAE
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