Gene TM1040_3791 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_3791 
Symbol 
ID4074885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008042 
Strand
Start bp39882 
End bp40088 
Gene Length207 bp 
Protein Length68 aa 
Translation table11 
GC content62% 
IMG OID638004450 
Producthypothetical protein 
Protein accessionYP_611185 
Protein GI99077926 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.00043299 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAACC ACTACGTCGC AACCGTCCCG GTCAAGTTTA CCGACACCGA TGGCCAGGAG 
CGCACCCGTT TTCAGCGCGT GGGTGCGATG TTCCGCAACA CCCGGGGCGG GGATGGCTCG
GAGTTCTTTA GCCTCAAGCT CGACTTTCCC GTCGCGGTCT CGGAGCTGGT GGTGTTTCCG
CCGAGCGCAA AGGATCCCCA AGACTGA
 
Protein sequence
MTNHYVATVP VKFTDTDGQE RTRFQRVGAM FRNTRGGDGS EFFSLKLDFP VAVSELVVFP 
PSAKDPQD