Gene TM1040_3769 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_3769 
Symbol 
ID4074941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008042 
Strand
Start bp7780 
End bp8247 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content62% 
IMG OID638004422 
Producthypothetical protein 
Protein accessionYP_611164 
Protein GI99077905 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value0.787585 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACAACA CCGGGCGCAT GTGGCGCCTG CGCAATGATC CGGCAACGAA GACCGACGGC 
GACATCGCCA AGGCCATGCG CAATGCGTTC ATCGCGCGCC ATTGCAGCTG TACCTGGGTG
ACGCTTCCAG ACGATGCCGA TATTTCTGGG TTAGAGGCGA AGGTAATCGC CCTCGTGACG
TCCGACATGG TGGCCTGGAA CCGGCGGGGC ATGCACGTCT ACGACGGGCC TGCCGAGCTG
GTTGACGCTT TGCTCAAAGC GTTGCGGCTG TCGCCTGTCG AGCGCGCTGC GATTGCCCGC
CAGCAAGTAC GGCAGATGGC CGGCGAGAGC GCCGCTCAGG CTCCGCATGA CACCGCGCCT
GTGCTTGATG ATGTCTGTGT TGCTTATCCG CGACACCCTC AATTCACTTC TATTGCTTCC
GCAGTGCTTC CAGTGCAACG CAAGCGGCCT CGCGGATGCG AGGGTTAA
 
Protein sequence
MYNTGRMWRL RNDPATKTDG DIAKAMRNAF IARHCSCTWV TLPDDADISG LEAKVIALVT 
SDMVAWNRRG MHVYDGPAEL VDALLKALRL SPVERAAIAR QQVRQMAGES AAQAPHDTAP
VLDDVCVAYP RHPQFTSIAS AVLPVQRKRP RGCEG