Gene Sala_3214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_3214 
Symbol 
ID4074352 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008036 
Strand+ 
Start bp23364 
End bp24275 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content59% 
IMG OID638004415 
Producthydrogenase accessory protein HypB 
Protein accessionYP_611146 
Protein GI98152897 
COG category[K] Transcription
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0378] Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase 
TIGRFAM ID[TIGR00073] hydrogenase accessory protein HypB 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGCGGCA CCTGCGGATG CACCGATCCT GACAACGAGA TCGCGATGAT TGACCCGGAA 
ACCGGAAAGC GAGTGCTGCT TCGCAGCGGC GATGACCATT CCCACGATCA TGACCACTCC 
CACGATCATG ACCACTCCCA CGATCACACT CATTCACACG ATCATGATCA TTCACACGGG 
CACCATCATC ACCACCATCA TGATCACGGG CATGACCATC ACCACCACGG CGAACAAGCG 
GCGCGTGTAT CACTGGAAAC CGCCGTGCTT GACCGGAATG ATCGCCAGGC GGCTCGCAAC 
CGGGGCTGGT TCGAAGGGCG CGGTGTTGTC GCGCTCAATC TCGTCAGTTC GCCAGGGGCT 
GGCAAGACGA CCTTGCTCGA AACCACGATC CGGGCGCTGG AAGGAAGTCT GCCGATTGCC 
GTTATCGAGG GTGATCAACA GACGGCCAAT GACGCCACGC GCATTCGCGA AGCGGGGGCC 
CGTGCAATCC AGATCAACAC TGGGGCCGGC TGTCACCTCG AAGCCGATAT GGTTGCCCGC 
GCTGTTGAAG AACTCGCACC GAAATCCGGC TCGTTGCTGC TGATCGAGAA TGTCGGCAAT 
CTTGTTTGTC CGGCGATGTT CGATCTGGGT GAACGGATGA AGGTCGCCGT TATCTCCACC 
CCGGAGGGCG AGGACAAGCC ACTCAAATAC CCGCACATGT TCCGCGCAGC AGAGCTGGTG 
TTGATCAACA AGATCGACCT CGCCCCGCAT GTTGGATTCG ACGAGGCCGC ATGCCGTGCA 
AACATCTCCG CAGTAAACCC CAATGCGCTC GTCTTGCTGG TTTCCGCCCG CACCGGTGAA 
GGGATGGACG CGTGGTACGA TTTTCTGCGA GCAATGGCGT CAGCAGCCGC AGATGGCGGG 
TGCCTCATTT AG
 
Protein sequence
MCGTCGCTDP DNEIAMIDPE TGKRVLLRSG DDHSHDHDHS HDHDHSHDHT HSHDHDHSHG 
HHHHHHHDHG HDHHHHGEQA ARVSLETAVL DRNDRQAARN RGWFEGRGVV ALNLVSSPGA 
GKTTLLETTI RALEGSLPIA VIEGDQQTAN DATRIREAGA RAIQINTGAG CHLEADMVAR 
AVEELAPKSG SLLLIENVGN LVCPAMFDLG ERMKVAVIST PEGEDKPLKY PHMFRAAELV 
LINKIDLAPH VGFDEAACRA NISAVNPNAL VLLVSARTGE GMDAWYDFLR AMASAAADGG 
CLI