| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_2244 |
|---|
| Symbol | |
|---|
| ID | 4057212 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Deinococcus geothermalis DSM 11300 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008025 |
|---|
| Strand | + |
|---|
| Start bp | 2367808 |
|---|
| End bp | 2369010 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641231291 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_605707 |
|---|
| Protein GI | 94986343 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.802988 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGACC TGTCCCTCTC CCCTGCTGCA CCGATTTCCC CCATTCGTGC CGAGGCTGCC
CGCCGCGCGC TGGGGGCCGT GTTCCTGGTC AACGGCACGC TGTTTGCGAC CTGGGCGGTG
AATATTCCCG GCGTGCGCGA CCAGCTGGGT CTCAGCGAGG CGCAGGTGGG GCTGGCCCTG
CTGGCGGTCG GAGTGGGCAG CCTGGTCAGC ATGCCGCTCA CCGGAGGGTG GACGGCGCGT
TTCGGGAGCG ACCGGGTGAC CCGGGTAGCG GTCGTACTGG CAATGCTGGC GCTGCTCCCC
GTCCTCTTGG CGCCGAACCT GCTGCTCCTG GTGGTGGCCC TAGGCCTGCT GGGGGCAGCA
AACGGAGCGC TCGATGTCGC CATGAACGCG CAGGGGGTGA CGGTGGAACG GCGGCTGGCC
CGGCCCGTGA TGAGCCGCTT TCATGCCTAC TTCAGTCTGG GGGGCGTGGT GGGCGCGCTG
CTGGGCACCC TGCTGGTTGG CCGCGTGCCG CTGCTCGCCC ACGGCGCGCT GGTGGTGATC
CTCACGACCC TCGCTGGGTT CCTGGCAGGC CGCGCGCTGC TGCCCGACCT GCCCGCTCAT
CCACCGCAGG CGCCGGCCAC CACACCCCAG AACCGTCTCG GCTTAAGCGC GCCGGCGCTG
CTGCTCGGGG GCCTATGCTT TCTGGGGATG CTCTCGGAAG GCGCCAATTA CGACTGGGCC
ACCCTCTACT TCCGAGACGT GTTGGAGCTG GCAGGAGGCA ACGCGGGAAT CGGCTACGCA
GCCTTTGTGG CGGCCATGAC CTTGGGCCGC TGGTTCGGGG ACCGCGTGCG CATTCGTCTG
GGAGACGAGG TCGTGGTGCG AGGCGGAGCG CTGCTGACTG CCGCCGGACT GGGCCTCGCG
CTGCTGGTGC ATGACCCGTT GGTCGCCACG CTGGGCTTCG CGCTATCGGG CCTGGGCCTC
AGCAACGTGG TCCCCGTGCT GTACGGGACC GCTGGACACG CGCTGGCCGG GCCAGGCATC
GCGCAGGTCG CCACCATCGG GTACGCGGGA TTTCTGCTGG GTCCGCCTGT CATCGGCTTT
ATTGCGGGAC AGGTGGGCCT ACCCGCAGCG CTGGGCATCG CCCTGCTCGG TGCAGCTCTG
GTGGCGGTGC TGGGTGGCCG AGCCTTTGCC CTGGTGCGGG AAAAACGCCG GACAGCCGCA
TAG
|
|---|
| Protein sequence | MTDLSLSPAA PISPIRAEAA RRALGAVFLV NGTLFATWAV NIPGVRDQLG LSEAQVGLAL
LAVGVGSLVS MPLTGGWTAR FGSDRVTRVA VVLAMLALLP VLLAPNLLLL VVALGLLGAA
NGALDVAMNA QGVTVERRLA RPVMSRFHAY FSLGGVVGAL LGTLLVGRVP LLAHGALVVI
LTTLAGFLAG RALLPDLPAH PPQAPATTPQ NRLGLSAPAL LLGGLCFLGM LSEGANYDWA
TLYFRDVLEL AGGNAGIGYA AFVAAMTLGR WFGDRVRIRL GDEVVVRGGA LLTAAGLGLA
LLVHDPLVAT LGFALSGLGL SNVVPVLYGT AGHALAGPGI AQVATIGYAG FLLGPPVIGF
IAGQVGLPAA LGIALLGAAL VAVLGGRAFA LVREKRRTAA
|
|---|
| |