Gene Dgeo_2238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_2238 
Symbol 
ID4057206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp2358053 
End bp2359006 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content59% 
IMG OID641231284 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_605701 
Protein GI94986337 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAATC TTGCAGGAAA AGTTGTGGTG ATTACCGGCG CGAGCAGTGG CCTGGGCGAG 
GCGACCGCCC GCTTGCTCTC CGAGCAAGGC GCTCTTGTCG TGTTGGGCGC TCGCCGCATC
GATCGTCTGC AGCGGCTGGT GGAAGAGCTG AACAACCGAG GTGGTCAGGC GACCGCTGTT
CAGACTGATG TGAGAAACCG TGAGCAGGTC AAACGTTTGG TAGACACTGC GGTGGAAGCC
CATGGTCGTT TGGATGTCAT CATCAACAAC GCTGGTCTGA TGCCGCAGTC CCTGCTCGAA
CGCCTCAAGG TAGAGGAATG GGATCAAATG ATCGATGTGA ATATCAAGGG CGTCCTCTAT
GGCATTGCGG CTGCGCTGCC GTACATGATC GCGCAGCAGT CTGGACATAT CATCAATGTG
TCTTCTGTGG CCGGGCACAA AGTCGGCCCT GGCAGCGCGG TCTATGCGGC GACCAAACAC
GCGGTGCGGG CGTTGTCCGA GGGGCTTCGC CAAGAGGTGA AGCCCTATCA CCTTCGCACG
ACTGTGATTT CACCAGGTGC AGTTGCCACA GAGTTGCCAA GCACCATCAC AGATGAGCAG
GTGGGCGAGC GTCTTCACCA GTTCTATGAG CAGACGGCAA TCCCAGCGGA CTCGTTTGCG
CGGGCGGTAG TCAGCCAGAA GACGTGGATA TCAATGAGAT CCTCTTCCGA CCCACCTGCC
AGGTGCTGTG AGGGCGGCAT CTGCATGACC CTGCGCATAA CCCTGCCCCC GGACCGCTGG
CCTGTCGACC CCACTGCGGT CTTGGCTGAG TCTCCTGGGT TCCTGATCAG TGACCTGATG
GTCATCTTCT GGTCAGAGAG GAGGATGATC ACGAAGATTT CAGTGCACAG GCTCCCAGCC
CTCGGGCAGA GGTCTGGCCG ACGGGTTCAC CGGCACCGTC TGCATAGATC CTGA
 
Protein sequence
MSNLAGKVVV ITGASSGLGE ATARLLSEQG ALVVLGARRI DRLQRLVEEL NNRGGQATAV 
QTDVRNREQV KRLVDTAVEA HGRLDVIINN AGLMPQSLLE RLKVEEWDQM IDVNIKGVLY
GIAAALPYMI AQQSGHIINV SSVAGHKVGP GSAVYAATKH AVRALSEGLR QEVKPYHLRT
TVISPGAVAT ELPSTITDEQ VGERLHQFYE QTAIPADSFA RAVVSQKTWI SMRSSSDPPA
RCCEGGICMT LRITLPPDRW PVDPTAVLAE SPGFLISDLM VIFWSERRMI TKISVHRLPA
LGQRSGRRVH RHRLHRS