| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_2022 |
|---|
| Symbol | |
|---|
| ID | 4058485 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Deinococcus geothermalis DSM 11300 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008025 |
|---|
| Strand | + |
|---|
| Start bp | 2132114 |
|---|
| End bp | 2132854 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641231061 |
|---|
| Product | RNA methyltransferase TrmH, group 3 |
|---|
| Protein accession | YP_605485 |
|---|
| Protein GI | 94986121 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0566] rRNA methylases |
|---|
| TIGRFAM ID | [TIGR00186] rRNA methylase, putative, group 3 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGCTGT ACGGACGGAA TCCGGTGCTG GAGGCCCTCA GGGACGGGCG CGTGACGGAG
GTGCTCGTCG CGCGCGGCGT CGAGGAGGCG TTCGTGCGCA GCCTCAAAGC GTTTGACGTC
CGGCTACGCT TTGCCCCGCG CATCGAACTT GACCAACTGG CAGGAACCAC CCAGCACCAG
GGCGTGATCG CGGAGGTGGA AGACCTCGCC TGGGCGACGG TAGACGACAT TCTCGATCGG
GCCGAGGCAC GCGGTGAGGA TCTGCTGATC GTCCTGCTCG ACGGCATCAC CGATCCCCGC
AACTTCGGCG CGATCATCCG CTCGGCGGAG GTGCTGGGCG CTCACGGCGT CGTCGTGGAG
GAACGCCGCA GCGCCCCCCT CTCCCCGGTG GTGGTCAAGA CGGCGGCGGG CGCGACCAGT
TACCTGCCGG TCGCCCAGAC CAAGAACCTT CCGCGCCTAA TCGACGCGCT CAAAGAAGAC
GGCGTATGGA TCTATGGCGC GGCGGGCGAG GCGGCGCAGG ACATAGGCCG CACCGACCTG
AGCGGCAAGG TCGCCCTGGT GATCGGCGCG GAGGGGGAGG GCCTGCGCCG GCTGGTGCGT
GAGAAATGCG ACGCCCTGGT GCGCATTCCC ACTCGCGGCC AGGTGCAGAG CCTCAACGCC
TCGGTCGCGG CGGGCATCCT GTTGTATGAG GCGGCGCGGG CCAGAGACAA GAACAAGAGC
AAGAACAAGG GGAAGCAATG A
|
|---|
| Protein sequence | MLLYGRNPVL EALRDGRVTE VLVARGVEEA FVRSLKAFDV RLRFAPRIEL DQLAGTTQHQ
GVIAEVEDLA WATVDDILDR AEARGEDLLI VLLDGITDPR NFGAIIRSAE VLGAHGVVVE
ERRSAPLSPV VVKTAAGATS YLPVAQTKNL PRLIDALKED GVWIYGAAGE AAQDIGRTDL
SGKVALVIGA EGEGLRRLVR EKCDALVRIP TRGQVQSLNA SVAAGILLYE AARARDKNKS
KNKGKQ
|
|---|
| |