| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_1928 |
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| Symbol | |
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| ID | 4057676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Deinococcus geothermalis DSM 11300 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008025 |
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| Strand | - |
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| Start bp | 2031373 |
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| End bp | 2032992 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641230960 |
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| Product | major facilitator transporter |
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| Protein accession | YP_605392 |
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| Protein GI | 94986028 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00178599 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.278275 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCTG CTCCTTCTTC TGCCGGCCTC GCACCTCGGG ACAAGATCTT GGCCTTTGTC
GGCATCCTGA CGGTGCTGTT TCTCTCCAGC CTGAATATGA CGGTGGTCGG GAGCGCGATG
CCGCGCGTGA TCTCGGACCT GGGCGGCTTT CACCTGTACG CCTGGGCCTT TACCGCCTAC
TCGCTCGCCA CCACAATTAC CGTCCCCATC GTGGGCACGG TCAGCGACCG CTATGGCCGC
CGCCCACTGA TTCTGCTCGG TATTGTTGTG TTCACCCTGG GCAGCGTGCT GCTGGGCTTC
GTGCAAAACA TGAATCAGCT GATTGTGCTG CGGGCGCTGC AGGGCGTGGG CGGCGGCATG
CTGATGGCGA TGAGCTTCAC CGCCATCGCG GACCTCTTCA CGCCCATCGA GCGTGGCCGC
TACCAAGGGT ACACCGGGGC GGTCTGGGGC ATCAGCAGTG TGGTGGGGCC GCTGGTGGGG
GGCTTCCTGA CCGACCATTT GGGCTGGCGC AGCGTGTTCT TCGTGAACGT GCCCTTTGCG
CTGCTGGCAC TGTACTTTGT CGGCCGTTTC TTCCGGATGC CTGCTCCCAG CGCTTCGCGC
ATGCAGCGTC CGTTTGACGC GCTGGGGGCG CTGCTGCTCG CGGGCGCGGT CGTAACCCTG
ACACTGGCCC TGTCCTGGGG AGGCGGCACC TATGCCTGGG ACAGTCCCCG CATTCTGGGC
CTGCTGGCCG CGACCCTGGT GCTGGGCGGA GGGTATGTGT GGCACAGCCG CCAGCAGGCG
CAGCCCATCC TCAACCTGCG ACTGCTGCGT GACCCGGCCA TCTCGCTCGC GTCCTTGGCG
GGCTTCTTGA CGAGCGCGGG GATGTACGCC GCGATTCTGT ACCTGCCGCT CTACATGCAG
GGCGTGCGGG GCAGCAGCGC CAGCGGGAGC GGCCTGGCCC TCACGCCCCT GATGTTTGGA
TTGATCGTCA CGAGCACCCT CAGCGGCCAG ATCGTCAGCC GCACCGGGCG CTACAAGGGG
CTGATTATGG GAGGCGCTCT GGTCGCCACC GCCGCCCTGC TGCTCAGCAC CACGCTGAGC
ACCACAACGC CGCTGTGGAT CGCGGTCGGG CTGATGGTGC TGCTGGGTCT GGGCCTTGGC
CCGGTCAACA GCCAGCTCAC GCTCGCGGTG CAGAATGCCG CGCCGCGCGA ACAGCTTGGC
AGCGCCACCA GCGGCAACCA GTTTTTCCGG CAGATCGGCG GCACGCTGGC CGTCAGCCTC
TTCGGGGCGC TGGTGAACGC GCAGCTCGCG CAGAACCTCG CCGCAAAGCT GCCGCCCGCA
GCTGCCCAGC TGCCCGCCCC CATGCAGGAC GCCATCGCCA ACCCCAACGT GCTGTCGAGC
CCTCAGGCCA CCGGCCAACT GGAAGCGGCC CTGGCCCGTC TGGGTCACGC GGACCTGATC
ATGCCCATTC TGACGGCCCT GCGCGGCGTG ATGGCGGGCG CCATTGATCA CGTCTTCCTG
ATTGCGGGTG TGCTGGTCGG TGTCGCCTTT TTGGTCACGG CCCTGATGCC CGAACGGCCC
CTCGCCGGGC GGAGAGCCGG AGCGCGGGTG GAGGGACGGC AGGCGGCGGC GACGGATTGA
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| Protein sequence | MTAAPSSAGL APRDKILAFV GILTVLFLSS LNMTVVGSAM PRVISDLGGF HLYAWAFTAY
SLATTITVPI VGTVSDRYGR RPLILLGIVV FTLGSVLLGF VQNMNQLIVL RALQGVGGGM
LMAMSFTAIA DLFTPIERGR YQGYTGAVWG ISSVVGPLVG GFLTDHLGWR SVFFVNVPFA
LLALYFVGRF FRMPAPSASR MQRPFDALGA LLLAGAVVTL TLALSWGGGT YAWDSPRILG
LLAATLVLGG GYVWHSRQQA QPILNLRLLR DPAISLASLA GFLTSAGMYA AILYLPLYMQ
GVRGSSASGS GLALTPLMFG LIVTSTLSGQ IVSRTGRYKG LIMGGALVAT AALLLSTTLS
TTTPLWIAVG LMVLLGLGLG PVNSQLTLAV QNAAPREQLG SATSGNQFFR QIGGTLAVSL
FGALVNAQLA QNLAAKLPPA AAQLPAPMQD AIANPNVLSS PQATGQLEAA LARLGHADLI
MPILTALRGV MAGAIDHVFL IAGVLVGVAF LVTALMPERP LAGRRAGARV EGRQAAATD
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