Gene Dgeo_1873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_1873 
SymbolrpsL 
ID4058999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp1970590 
End bp1971000 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content64% 
IMG OID641230901 
Product30S ribosomal protein S12 
Protein accessionYP_605337 
Protein GI94985973 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0048] Ribosomal protein S12 
TIGRFAM ID[TIGR00981] ribosomal protein S12, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.474423 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACCCTGC CTACCACACA GCAACTGCTC CGTAAGGGGC GCACCACCCT GCAGAAGAAG 
AGCAAGGTTC CCGCTCTCAA GGGGAGCCCC TTCCGCCGTG GCGTCTGCAC CGTCGTGAAG
ACCACGACGC CCAAGAAGCC CAACTCGGCG CTGCGCAAGA TCGCCCGTGT GCGTCTTTCC
AGCGGCTTTG AGGTGACGGC CTACATTCCT GGCGAAGGCC ACAACCTTCA GGAACACAGC
GTTGTGCTGA TCCGTGGAGG CCGTGTCAAG GACCTCCCCG GCGTGCGTTA CCACATTGTG
CGCGGCAGCC TCGACACCCA GGGCGTCAAG GACCGCAACA AGAGCCGTTC CAAGTACGGC
ACCAAGAAGC CCAAGGCTGG CGCGGCCGCC GCGGGCGCCA AGAAGAAGTA A
 
Protein sequence
MTLPTTQQLL RKGRTTLQKK SKVPALKGSP FRRGVCTVVK TTTPKKPNSA LRKIARVRLS 
SGFEVTAYIP GEGHNLQEHS VVLIRGGRVK DLPGVRYHIV RGSLDTQGVK DRNKSRSKYG
TKKPKAGAAA AGAKKK