Gene Dgeo_1855 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_1855 
SymbolrplE 
ID4057585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp1959345 
End bp1959884 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content58% 
IMG OID641230883 
Product50S ribosomal protein L5 
Protein accessionYP_605319 
Protein GI94985955 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0094] Ribosomal protein L5 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.215848 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.966911 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACGC TGAAAGCGAA GTACAACGAG CAGGTTCGGC CCGCGCTGAT GCAGCAGTTC 
GGCTACTCCA GCATCATGGC CGTGCCCCGC ATCGAGAAGA TCGTGATCAA CGAGGGCCTG
GGCTCATCCA AGGATGACAG CAAGGCCATC GATAAGGCCG CCAAGGAGTT GGCGCTGATC
ACGCTCCAGA AGCCTGTGAT CACCAAGGCT AAGAAGAGCA TCAGCAACTT TAAGCTGCGT
CAGGGGATGC CCGTCGGCGT CAAGGTCACG CTGCGCGGCG AGCGTATGTA CGTGTTCCTG
GAGAAGCTGA TCAATATCGG TCTGCCCCGC ATCCGCGACT TCCGCGGGAT CAACCCCAAC
TCATTTGATG GCCGTGGCAA CTACAACCTC GGCATCAAGG AGCAGCTGAT CTTCCCGGAG
ATCACCTATG ATATGGTGGA CAAGGTGCGT GGGATGGATA TCACAATCGT GACCACCGCG
AAAACCGATG AGGAAGCGCG CGCGCTCTTG CAGGCGATGG GCCTTCCGTT CCGCAAATAA
 
Protein sequence
MQTLKAKYNE QVRPALMQQF GYSSIMAVPR IEKIVINEGL GSSKDDSKAI DKAAKELALI 
TLQKPVITKA KKSISNFKLR QGMPVGVKVT LRGERMYVFL EKLINIGLPR IRDFRGINPN
SFDGRGNYNL GIKEQLIFPE ITYDMVDKVR GMDITIVTTA KTDEEARALL QAMGLPFRK