Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dgeo_1855 |
Symbol | rplE |
ID | 4057585 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Deinococcus geothermalis DSM 11300 |
Kingdom | Bacteria |
Replicon accession | NC_008025 |
Strand | - |
Start bp | 1959345 |
End bp | 1959884 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641230883 |
Product | 50S ribosomal protein L5 |
Protein accession | YP_605319 |
Protein GI | 94985955 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0094] Ribosomal protein L5 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.215848 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.966911 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGACGC TGAAAGCGAA GTACAACGAG CAGGTTCGGC CCGCGCTGAT GCAGCAGTTC GGCTACTCCA GCATCATGGC CGTGCCCCGC ATCGAGAAGA TCGTGATCAA CGAGGGCCTG GGCTCATCCA AGGATGACAG CAAGGCCATC GATAAGGCCG CCAAGGAGTT GGCGCTGATC ACGCTCCAGA AGCCTGTGAT CACCAAGGCT AAGAAGAGCA TCAGCAACTT TAAGCTGCGT CAGGGGATGC CCGTCGGCGT CAAGGTCACG CTGCGCGGCG AGCGTATGTA CGTGTTCCTG GAGAAGCTGA TCAATATCGG TCTGCCCCGC ATCCGCGACT TCCGCGGGAT CAACCCCAAC TCATTTGATG GCCGTGGCAA CTACAACCTC GGCATCAAGG AGCAGCTGAT CTTCCCGGAG ATCACCTATG ATATGGTGGA CAAGGTGCGT GGGATGGATA TCACAATCGT GACCACCGCG AAAACCGATG AGGAAGCGCG CGCGCTCTTG CAGGCGATGG GCCTTCCGTT CCGCAAATAA
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Protein sequence | MQTLKAKYNE QVRPALMQQF GYSSIMAVPR IEKIVINEGL GSSKDDSKAI DKAAKELALI TLQKPVITKA KKSISNFKLR QGMPVGVKVT LRGERMYVFL EKLINIGLPR IRDFRGINPN SFDGRGNYNL GIKEQLIFPE ITYDMVDKVR GMDITIVTTA KTDEEARALL QAMGLPFRK
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