Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dgeo_1805 |
Symbol | |
ID | 4056930 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Deinococcus geothermalis DSM 11300 |
Kingdom | Bacteria |
Replicon accession | NC_008025 |
Strand | - |
Start bp | 1921902 |
End bp | 1922774 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641230833 |
Product | ABC-2 type transporter |
Protein accession | YP_605269 |
Protein GI | 94985905 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGACCC CCCCCACCCC CGCGCCTGAC CCGGCGCGCA CCACGCCCGG CACCCTCGCG CACCAGATTC GCGCGGCCTG GGCCTTTGTG TTCCGCGACT ACCACCTCAC CCGGCGCTAC TGGTCCTGGG TGCTGGTCTT TACCTTCTAC GACATGGTGT CGGCGGCCAG CATCATGCTG ATCGGCGTGG CGGCGCACAA TCCTCGCCTG ACCCTCACCC TGCTGCTGGG CGCCGTGATG TGGTCCTTCC TGGGCCGCCT CTTCGGGGAG ATCGCCAACA GCATCAGCTA CGAACGCTGG GAAGGCACCA TCGAGTACAC CTTTATGGCC CCGGTCAGCC GCTTGACGCA TCTGGTCGGT GTGAGCCTCT TTGCGGGGGC CTACGCGCTG CTGCGCGGGG TGCTGGTGTT CCTGTTTATG AGCCTTTTCG TGGACATTGG GGCCAGCTTT ACCCAGGTGC TGGAGTGCCT GGTGGTGTTT ATGGTGGCCA GCCTGGGCTT TATGGGAATC GGCCTGATGG CGGCGGTGCT GCCGGTCATG AGCACCGAGA ACGGCGCGCA GGCCACCAAC ATCATTCAGG CCGTGTTCCT GCTGATCTCC GGTGTGTACT ACCCGGTCAG CGTCCTGCCC GCCTGGCTCC AGCCGATCAG CGCCCTCTCT CCGGCCACCT ATGCCCTGAA CGCCTGCCGC AAGATTCTGG GCGTCAACGG CACGGGGACC GCCATCCAGC CCGGCGTGTC CCTGGCGGGT GTGTTGCCGG AACTGGGCAT CCTGCTGCTG TTCGGCCTGA TCACCATCCC GCTGGGTCTA TTCGTATTTG GGCGGGCCGA AAGCTGGGCC AAACGCACTG GAAAGCTGAA GCGGGTGGGA TGA
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Protein sequence | MTTPPTPAPD PARTTPGTLA HQIRAAWAFV FRDYHLTRRY WSWVLVFTFY DMVSAASIML IGVAAHNPRL TLTLLLGAVM WSFLGRLFGE IANSISYERW EGTIEYTFMA PVSRLTHLVG VSLFAGAYAL LRGVLVFLFM SLFVDIGASF TQVLECLVVF MVASLGFMGI GLMAAVLPVM STENGAQATN IIQAVFLLIS GVYYPVSVLP AWLQPISALS PATYALNACR KILGVNGTGT AIQPGVSLAG VLPELGILLL FGLITIPLGL FVFGRAESWA KRTGKLKRVG
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