Gene Dgeo_1805 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_1805 
Symbol 
ID4056930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp1921902 
End bp1922774 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content65% 
IMG OID641230833 
ProductABC-2 type transporter 
Protein accessionYP_605269 
Protein GI94985905 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGACCC CCCCCACCCC CGCGCCTGAC CCGGCGCGCA CCACGCCCGG CACCCTCGCG 
CACCAGATTC GCGCGGCCTG GGCCTTTGTG TTCCGCGACT ACCACCTCAC CCGGCGCTAC
TGGTCCTGGG TGCTGGTCTT TACCTTCTAC GACATGGTGT CGGCGGCCAG CATCATGCTG
ATCGGCGTGG CGGCGCACAA TCCTCGCCTG ACCCTCACCC TGCTGCTGGG CGCCGTGATG
TGGTCCTTCC TGGGCCGCCT CTTCGGGGAG ATCGCCAACA GCATCAGCTA CGAACGCTGG
GAAGGCACCA TCGAGTACAC CTTTATGGCC CCGGTCAGCC GCTTGACGCA TCTGGTCGGT
GTGAGCCTCT TTGCGGGGGC CTACGCGCTG CTGCGCGGGG TGCTGGTGTT CCTGTTTATG
AGCCTTTTCG TGGACATTGG GGCCAGCTTT ACCCAGGTGC TGGAGTGCCT GGTGGTGTTT
ATGGTGGCCA GCCTGGGCTT TATGGGAATC GGCCTGATGG CGGCGGTGCT GCCGGTCATG
AGCACCGAGA ACGGCGCGCA GGCCACCAAC ATCATTCAGG CCGTGTTCCT GCTGATCTCC
GGTGTGTACT ACCCGGTCAG CGTCCTGCCC GCCTGGCTCC AGCCGATCAG CGCCCTCTCT
CCGGCCACCT ATGCCCTGAA CGCCTGCCGC AAGATTCTGG GCGTCAACGG CACGGGGACC
GCCATCCAGC CCGGCGTGTC CCTGGCGGGT GTGTTGCCGG AACTGGGCAT CCTGCTGCTG
TTCGGCCTGA TCACCATCCC GCTGGGTCTA TTCGTATTTG GGCGGGCCGA AAGCTGGGCC
AAACGCACTG GAAAGCTGAA GCGGGTGGGA TGA
 
Protein sequence
MTTPPTPAPD PARTTPGTLA HQIRAAWAFV FRDYHLTRRY WSWVLVFTFY DMVSAASIML 
IGVAAHNPRL TLTLLLGAVM WSFLGRLFGE IANSISYERW EGTIEYTFMA PVSRLTHLVG
VSLFAGAYAL LRGVLVFLFM SLFVDIGASF TQVLECLVVF MVASLGFMGI GLMAAVLPVM
STENGAQATN IIQAVFLLIS GVYYPVSVLP AWLQPISALS PATYALNACR KILGVNGTGT
AIQPGVSLAG VLPELGILLL FGLITIPLGL FVFGRAESWA KRTGKLKRVG