| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_1332 |
|---|
| Symbol | |
|---|
| ID | 4056965 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Deinococcus geothermalis DSM 11300 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008025 |
|---|
| Strand | - |
|---|
| Start bp | 1415416 |
|---|
| End bp | 1416081 |
|---|
| Gene Length | 666 bp |
|---|
| Protein Length | 221 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641230346 |
|---|
| Product | L-serine dehydratase, iron-sulfur-dependent, beta subunit |
|---|
| Protein accession | YP_604797 |
|---|
| Protein GI | 94985433 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1760] L-serine deaminase |
|---|
| TIGRFAM ID | [TIGR00719] L-serine dehydratase, iron-sulfur-dependent, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.385667 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCTGC TCGACATGAT CGGTCCGGTG ATGATCGGCC CGAGCAGCAG CCACACGGCG
GGTGCCTGCC GGCTGGGTCT GGTCGCCCAC CATCTGCTCG GGGAGGCGCC GCGCCGCGCG
CTGATTGGCC TGCACGCTTC CTTTGCCAAG ACCGGGCGGG GTCACGGCAC CCACCTCGCG
CTGGTGGCGG GCCTGCTCGG CTTTGCCCCC GACGACCCCC GTTTGCCCCG CGCCTTCGAG
GAGGCTCAGG CGGCGGACCT CAGGGTCGAG TTCAAGGACA TGGACCTAGG GGATGTCCAT
CCCAACACCG CGCTCATTGA GTTGCATGGG GACACCCAGC AGGTGACGGT GCAGGGCAGT
TCCACCGGCG GCGGCGTGAT CCAGGTCACG CAGGTGCAGG GCCTGGGCGT GAACTTCAGC
GGTGCCAGTC CCACCGTCCT GCTCCGTTAC ACCGATGCGG TGGGCATGAT CGCCCGCATC
GCCACCACCA TTGCCGCCGA CGGCGTGAAC ATCGCCGCGC TGACCTGCAC CCGTGAGACC
CGCGGTGGCC AGGCCCTCCT CGCCATCGAA CTCGACGCGC CGCTCAGCGC GGAAGCCCTC
GCCTTTTTGA ACCGCTGGCC CGATACCAAT TGGGTGCGCC TGCTGCCCAA ACTGATGGAA
GGCTAA
|
|---|
| Protein sequence | MSLLDMIGPV MIGPSSSHTA GACRLGLVAH HLLGEAPRRA LIGLHASFAK TGRGHGTHLA
LVAGLLGFAP DDPRLPRAFE EAQAADLRVE FKDMDLGDVH PNTALIELHG DTQQVTVQGS
STGGGVIQVT QVQGLGVNFS GASPTVLLRY TDAVGMIARI ATTIAADGVN IAALTCTRET
RGGQALLAIE LDAPLSAEAL AFLNRWPDTN WVRLLPKLME G
|
|---|
| |