Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dgeo_1331 |
Symbol | |
ID | 4056964 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Deinococcus geothermalis DSM 11300 |
Kingdom | Bacteria |
Replicon accession | NC_008025 |
Strand | - |
Start bp | 1414504 |
End bp | 1415394 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641230345 |
Product | L-serine dehydratase, iron-sulfur-dependent, alpha subunit |
Protein accession | YP_604796 |
Protein GI | 94985432 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1760] L-serine deaminase |
TIGRFAM ID | [TIGR00718] L-serine dehydratase, iron-sulfur-dependent, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.742186 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCTCG AAGAACTGAT GAATGCTCCT GCGCCCGCCT CGAGCTGGGT GCTGGCGCAG GATTGCCAGG AAACCGGCCT AGACCCCCAC GACATCCGCG CCGAGATGGC CCGCCGCCTC CGTGAGATGC GGGCCTCGAT CGAGCGCGGC CTGAACAGCG ACGCCAAAAG CATCACCGGG ATGGTGGGCT GGAACGCCAA GGGCCTCTGG GACGCGCCTG ATGTGTTGGG GGCGCCGCTG CTGAAGCGCG TGCAGGCCTA CGCTATGGCG GTGAATGAGG AAAACGCCCG GATGGGCCGC ATCGTTGCCG CCCCCACCGC GGGCAGCGCG GGCACCATTC CCGGCGCCCT GATCGGCGTG GCCGACCATC TGGGCCTCCC CGACGAGCGG TTGGTGGATC CCTTGATTCT GGCTGCTGGG GTGGGCAAGG CGATCAGCAA GCGTATGTTC ATTTCCGGGG CGGCGGGTGG CTGTCAGGCC GAGATCGGCT CCAGCGCAGC GATGGCCGCC GCCGCCGTCA CTGAGCTGCT GGGCGGAACG CCGCGCGCCT GTGTTCACGC GGCGTCCCTG GCGCTGATGA ACACCATCGG GCTGGTGTGT GACCCGGTGG GCGGCTACGT GGAGGTGCCG TGCGTGAGCC GCAATGCCTT CTACGCGGTC CACGCTGTCA GCGCGGCGCA GCTCGCCCTG GCGCAGCTCG AGTCCTTCAT CCCGCCCGAC GAGGTGCTGG GCGCAATGGC CTCGGTGGGC CGCATGATGC CCCCCGAACT CCGCGAGACG GCCGAAGGTG GCCTGGCCCA GACGCCAACC GGTTTGGCCG TGGCCGCGCG GATGGAAGGG AAGGAGGGCG GGGAACAGCC CAGCGGGATG GTGGAACTGC CGCTGGCCTA G
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Protein sequence | MTLEELMNAP APASSWVLAQ DCQETGLDPH DIRAEMARRL REMRASIERG LNSDAKSITG MVGWNAKGLW DAPDVLGAPL LKRVQAYAMA VNEENARMGR IVAAPTAGSA GTIPGALIGV ADHLGLPDER LVDPLILAAG VGKAISKRMF ISGAAGGCQA EIGSSAAMAA AAVTELLGGT PRACVHAASL ALMNTIGLVC DPVGGYVEVP CVSRNAFYAV HAVSAAQLAL AQLESFIPPD EVLGAMASVG RMMPPELRET AEGGLAQTPT GLAVAARMEG KEGGEQPSGM VELPLA
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