Gene Dgeo_1331 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_1331 
Symbol 
ID4056964 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp1414504 
End bp1415394 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content69% 
IMG OID641230345 
ProductL-serine dehydratase, iron-sulfur-dependent, alpha subunit 
Protein accessionYP_604796 
Protein GI94985432 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1760] L-serine deaminase 
TIGRFAM ID[TIGR00718] L-serine dehydratase, iron-sulfur-dependent, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.742186 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTCG AAGAACTGAT GAATGCTCCT GCGCCCGCCT CGAGCTGGGT GCTGGCGCAG 
GATTGCCAGG AAACCGGCCT AGACCCCCAC GACATCCGCG CCGAGATGGC CCGCCGCCTC
CGTGAGATGC GGGCCTCGAT CGAGCGCGGC CTGAACAGCG ACGCCAAAAG CATCACCGGG
ATGGTGGGCT GGAACGCCAA GGGCCTCTGG GACGCGCCTG ATGTGTTGGG GGCGCCGCTG
CTGAAGCGCG TGCAGGCCTA CGCTATGGCG GTGAATGAGG AAAACGCCCG GATGGGCCGC
ATCGTTGCCG CCCCCACCGC GGGCAGCGCG GGCACCATTC CCGGCGCCCT GATCGGCGTG
GCCGACCATC TGGGCCTCCC CGACGAGCGG TTGGTGGATC CCTTGATTCT GGCTGCTGGG
GTGGGCAAGG CGATCAGCAA GCGTATGTTC ATTTCCGGGG CGGCGGGTGG CTGTCAGGCC
GAGATCGGCT CCAGCGCAGC GATGGCCGCC GCCGCCGTCA CTGAGCTGCT GGGCGGAACG
CCGCGCGCCT GTGTTCACGC GGCGTCCCTG GCGCTGATGA ACACCATCGG GCTGGTGTGT
GACCCGGTGG GCGGCTACGT GGAGGTGCCG TGCGTGAGCC GCAATGCCTT CTACGCGGTC
CACGCTGTCA GCGCGGCGCA GCTCGCCCTG GCGCAGCTCG AGTCCTTCAT CCCGCCCGAC
GAGGTGCTGG GCGCAATGGC CTCGGTGGGC CGCATGATGC CCCCCGAACT CCGCGAGACG
GCCGAAGGTG GCCTGGCCCA GACGCCAACC GGTTTGGCCG TGGCCGCGCG GATGGAAGGG
AAGGAGGGCG GGGAACAGCC CAGCGGGATG GTGGAACTGC CGCTGGCCTA G
 
Protein sequence
MTLEELMNAP APASSWVLAQ DCQETGLDPH DIRAEMARRL REMRASIERG LNSDAKSITG 
MVGWNAKGLW DAPDVLGAPL LKRVQAYAMA VNEENARMGR IVAAPTAGSA GTIPGALIGV
ADHLGLPDER LVDPLILAAG VGKAISKRMF ISGAAGGCQA EIGSSAAMAA AAVTELLGGT
PRACVHAASL ALMNTIGLVC DPVGGYVEVP CVSRNAFYAV HAVSAAQLAL AQLESFIPPD
EVLGAMASVG RMMPPELRET AEGGLAQTPT GLAVAARMEG KEGGEQPSGM VELPLA