| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_1326 |
|---|
| Symbol | |
|---|
| ID | 4056959 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Deinococcus geothermalis DSM 11300 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008025 |
|---|
| Strand | - |
|---|
| Start bp | 1409997 |
|---|
| End bp | 1411391 |
|---|
| Gene Length | 1395 bp |
|---|
| Protein Length | 464 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641230340 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_604791 |
|---|
| Protein GI | 94985427 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.367254 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTTCTTG TCACGTACAC TCGCAGGGTC ATGACTGCCC TACCCAAGGC TGTTTCCCTC
GATGACGCGA TTGACCGGCT GGGTCTGGGC CGCTTTCAGT GGCGGCTGCT GGCGATCTGC
GGCTTGACCT GGGCGGCGGA CGCCATGGAG GTTCTCCTGA TGGGCTTCGC GCTCCCCGGC
ATCAGCGTCG CGTTCGGGCT GACGCGCGGC TCAGCAGACG CGACCCTGCT GCTGACCGCC
ACTTTTGCTG GGATGCTGGT GGGCGCGCTG TTCTGGGGCT GGCTGGCCGA CCGAGTCGGA
CGGCGGGCGG TGTTTCTGAC CACCGTATCG CTGGGGGTGG TCTTCGGCCT GTGCGGGGCG
TTTGCGCCGG GGGTGACCTG GTTGATTTTC GCCCGCTTCC TGACCGGCTT TGCCATCGGT
GGGACGCTGC CGGTGGACTA CGCGATGATG GCCGAATTTG TGCCGACCGC GTGGCGGGGC
CGTTTTCTGG TGTACCTCGA GAGTTTCTGG GCGCTGGGGA CCGTCGCGGT GGCGGCGCTC
GCGTGGTGGC TGAGCACCCT GTTCGAACCA GCCCAGGCGT GGCGCTGGTT GCTCGGCCTG
GCCGCCTTGC CGGGCGTGAT CGGCCTGCTG GCGCGGCTGG GCATTCCCGA CTCGCCGCGC
TCGCTGCTCG TGCGGGGCCG GGAACCGGAG GCACGCGGCG CGCTCCTGCG AGTGGCCCGG
GCCAACGGGA CCACGCTGCC GGAGGTACCG CTGGTGGTCC CGCCCGCCGC CCCGCGGGTG
ACCCCCGCCG CCCTCTTCCA GGGCATGCTG CGCCGCCGCA CCGTGCTGCT CGCGCTGATC
TGGTTTGGCC TTAGCCTGGG GTACTACGGC ATCTTCTCTT GGTTGCCGTC GTATCTCCGG
GCGCAGGGTC TGGAGCTGGG GGCGGTGTAC CGCACGACGC TGCTGCTGGC GCTGGCCCAG
ATTCCCGGGT ACGTGCTGGC CGCCTCTCTG GTGGAAAAGA TCGGGCGGCG GGCTACCTTG
GTGGGCTACC TGGCAAGTTC GGCGCTGGGC GCCTACCTCT TCCTGCTGGC CGGAACGCCG
GGCGCCGTGC TGGCGACCTC AGCGCTGCTG TCGTTCGCGC TGCTGGGGGC CTGGGGGGCG
CTGTATGCCT ACACGCCTGA ACTGTTCCCC ACGCCACTGC GCACCACCGG CATGGGCTTT
GTGAGCGGCA TGGCGCGGTT GGCGAGCGTC CTCTCGCCCA GCGTGGGGGC GCTGCTGCTC
ACCGGACAGC TGGGTGTGGC CCTCACCCTC TTTGCCGCCT GCTTTGCGCT GGCTGCCCTA
TGCGGCTGGG CCATCGGGAT CGAGACACGT GGGCGCAAGC TGCCGGAGAC GCTGCTGCCG
GAGAATGGGG CATGA
|
|---|
| Protein sequence | MLLVTYTRRV MTALPKAVSL DDAIDRLGLG RFQWRLLAIC GLTWAADAME VLLMGFALPG
ISVAFGLTRG SADATLLLTA TFAGMLVGAL FWGWLADRVG RRAVFLTTVS LGVVFGLCGA
FAPGVTWLIF ARFLTGFAIG GTLPVDYAMM AEFVPTAWRG RFLVYLESFW ALGTVAVAAL
AWWLSTLFEP AQAWRWLLGL AALPGVIGLL ARLGIPDSPR SLLVRGREPE ARGALLRVAR
ANGTTLPEVP LVVPPAAPRV TPAALFQGML RRRTVLLALI WFGLSLGYYG IFSWLPSYLR
AQGLELGAVY RTTLLLALAQ IPGYVLAASL VEKIGRRATL VGYLASSALG AYLFLLAGTP
GAVLATSALL SFALLGAWGA LYAYTPELFP TPLRTTGMGF VSGMARLASV LSPSVGALLL
TGQLGVALTL FAACFALAAL CGWAIGIETR GRKLPETLLP ENGA
|
|---|
| |