Gene Dgeo_1209 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_1209 
Symbol 
ID4057719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp1287714 
End bp1288484 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content63% 
IMG OID641230224 
ProductABC transporter related 
Protein accessionYP_604675 
Protein GI94985311 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.093328 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.473951 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGAAC AAGTGATGGC GGCAACCAGT GGGCAGGGCG TCGCAGCAGC CGTGACGCCG 
ATGCTGGAGC TGCGTGATGT GCATACCTAC TACGGCCATA TCCACGCCCT CAAGGGTCTG
CATCTGACCG TGAACCCCGG CGAGATCGTC GCGCTGATCG GCGGGAACGG CGCGGGCAAG
ACAACCACGC TGCGCACCAT CAGTGGCATG ATGAAACCCA AGGTGGGCAG CGTGATCTAT
GAGGGTCAGA ACATCACGGG TCTGCCCGCT CATAGCATCA TGCAGCGTGG CATCAGCCAC
GTGCCGGAAG GCCGCCGCAT CTTCGGCCAG CTCAGTGTGC GCGAGAACCT GGAGGTGGGC
GCGTACACCG TGACCGACCG GGCGGTGATT GAGGAGCGTA TCCAGGAAGC CTTCACGCTG
TTTCCCCGTC TCAAGGAACG TGAGACCCAG CTCGGCGGCA CCATGTCGGG CGGCGAGCAG
CAGATGCTGG CGATCGCCCG CGCCCTGATG GTCAATCCCC GGCTGCTGCT GCTCGACGAA
CCCTCGATGG GTCTCTCGCC CCTCTTTGTG GAGGCGATTT TCGACATCAT CGAGCAGCTG
AACAAGGAAC GTGGCACCAC CATCCTGCTC GTTGAGCAAA ACGCGAGCAT GGCCTTGGCG
ATTGCCCACC GCGCCTATGT GCTGCAAACC GGCGAGATCC GCCTCAGCGG CACCGCCGCA
CAAATCGCGC AGGACGAGAG CGTGCGCAAG GCGTATCTGG GCGACGAGTA A
 
Protein sequence
MPEQVMAATS GQGVAAAVTP MLELRDVHTY YGHIHALKGL HLTVNPGEIV ALIGGNGAGK 
TTTLRTISGM MKPKVGSVIY EGQNITGLPA HSIMQRGISH VPEGRRIFGQ LSVRENLEVG
AYTVTDRAVI EERIQEAFTL FPRLKERETQ LGGTMSGGEQ QMLAIARALM VNPRLLLLDE
PSMGLSPLFV EAIFDIIEQL NKERGTTILL VEQNASMALA IAHRAYVLQT GEIRLSGTAA
QIAQDESVRK AYLGDE