| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_1189 |
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| Symbol | |
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| ID | 4058805 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Deinococcus geothermalis DSM 11300 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008025 |
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| Strand | + |
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| Start bp | 1261508 |
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| End bp | 1263085 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641230204 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_604655 |
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| Protein GI | 94985291 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0440454 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAAC TGCTCCTGAC CGCCCTGCTC GCCTCCCTCC CGACCGCCGG AGCCGCCACG
CTGGTCTTCG GCAACAACGG TGATCCCGTG AGCCTCGAAT CCGGCAACAT CACGGACGGC
ATCAGCATCG CGGTGCAGCG TCAGATCTAT GACACCTTGG TCGACTTCAA GGACGGCACG
ACCGAGCCAG TCCCTGGCCT GGCGACGAGC TGGAAGGCCA ACAAGGACGC GACCCAGTGG
ACCTTCACGC TGCGCAAGGG CGTCAAATTC CAAGACGGTA CCCCCTTCAA CGCGGACGCC
GTGATCTTTA ACGTCAACCG CTGGTGGGAT CCCAAGAATG CCTATGGCTA CCGCGACCAG
GGTCATACCT ATGAGATCTG GGGCCAGCTG ATGGGAGGCT ACAAGGGCGA CGCCACCTCC
ATCCTTAAGA ACGTGGTGAA GCTCGACGAC TACACCGTGC GCTTCGAGAT GAATAAGCCC
TCCACGGTGT TCCCCAGTGT GATTGGGTCG GGGTATTTCG GCATCGCCAG TCCGGCGGCG
ATCAAGAAAG ACGGGGCCAA GTACGGCACG CCCGCCAGCA AGCCGGTCGG CACCGGTCCA
TTTATCTTCC AGAGCTGGAA GACCGGGGAC CGCATCGTCC TGCTGCCCAA CAAGCTGTAC
TGGGGCACCA AGCCCAAGGT GGACCAGCTG GTGATCCGCT CGATCAAGGA CGCCTCGCAG
CGCCTGAACG AACTCAAGGC CGGGACCATC GACTTTGCCA ATGACCTGAC ACCCGACAGT
CTCAAGGCGG TGCAGGCCGA CAAGAACCTG GTGGCGGTCA AGCGGCCCTC TTTCAACGTG
GGCTTCGTCA GCCTGAATAA CCGCAACCCG TACCTCAAAA ACGACAAGGT GCGGCAGGCG
ATCAGCATGG CGATCAACAA AAAGGCGATT GTTGAGGCCT TCTGGCCGGG GCTGGGCATC
AGCAACGCGA GCTTCTTGCC ACCGGTGCTG AGCTGGGCCA ACTCCAAGAA CGTGCCCGCC
GACTACAAGT ACGATCCGCA GGCGGCCAAG AAGCTGCTCG CAGATGCCGG GTACCCCAAC
GGCTTCTCTG TCGACCTGTG GTACATGCCG GTCAGCCGCC CCTACTTCCC GCAGCCCAAA
CCCATCGCGG AAGCCATCGC CGCCGACCTC AGCGCGATCG GCATCAAGGT GAACCTCAAG
ACCGAAGACT GGGCCAAGTA CTTGGAAGAT CGCCGCAAAG AACCCGGCTT TGACATGTAC
ATGATCGGCT GGACGGGCGA CTACGGCGAC CCCGATAACT TCTACAGTGC CTACTACGGA
CCGGGCGGTT CGGACGACAT CAACTGGAAC CCCCCGCAGC TCGAGAAGTT GCTGGAGCAG
GGCCGCGCTG CGGTGAGTCA GGCCGACAAG GCCAAAGCCT ACAGCCAGAT TCACGAGATC
ACCTACAAGG CGAACTACCG CATTCCGATG GTCCACAGCC AGCCGCTGGC CGCCGCGCGC
ACCTACGTGA AGGGCTGGGT GCCCAGCCCG CTGGGTAGCG AAGCATTCAA CACCATCAGC
GTCGTCGGCA AGAAATAA
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| Protein sequence | MKKLLLTALL ASLPTAGAAT LVFGNNGDPV SLESGNITDG ISIAVQRQIY DTLVDFKDGT
TEPVPGLATS WKANKDATQW TFTLRKGVKF QDGTPFNADA VIFNVNRWWD PKNAYGYRDQ
GHTYEIWGQL MGGYKGDATS ILKNVVKLDD YTVRFEMNKP STVFPSVIGS GYFGIASPAA
IKKDGAKYGT PASKPVGTGP FIFQSWKTGD RIVLLPNKLY WGTKPKVDQL VIRSIKDASQ
RLNELKAGTI DFANDLTPDS LKAVQADKNL VAVKRPSFNV GFVSLNNRNP YLKNDKVRQA
ISMAINKKAI VEAFWPGLGI SNASFLPPVL SWANSKNVPA DYKYDPQAAK KLLADAGYPN
GFSVDLWYMP VSRPYFPQPK PIAEAIAADL SAIGIKVNLK TEDWAKYLED RRKEPGFDMY
MIGWTGDYGD PDNFYSAYYG PGGSDDINWN PPQLEKLLEQ GRAAVSQADK AKAYSQIHEI
TYKANYRIPM VHSQPLAAAR TYVKGWVPSP LGSEAFNTIS VVGKK
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