| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_1106 |
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| Symbol | |
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| ID | 4058976 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Deinococcus geothermalis DSM 11300 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008025 |
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| Strand | + |
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| Start bp | 1176746 |
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| End bp | 1177657 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641230122 |
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| Product | pyridoxal biosynthesis lyase PdxS |
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| Protein accession | YP_604573 |
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| Protein GI | 94985209 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0214] Pyridoxine biosynthesis enzyme |
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| TIGRFAM ID | [TIGR00343] pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00472743 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00164202 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | TTGTTTTACC CTCTTTCCAT GACCGAGCAG AGCCAGACCG GAACCACCGA GATCAAGCGG
GGCTTCGCCG AGATGTTCAA GGGTGGCGTG ATCATGGATG TGGTGACGGC CGATCAGGCG
CGCATTGCGG AGGCGGCCGG CGCGACGGCC GTGATGGCGC TGGAGCGCGT TCCAGCGGAT
ATCCGCAAGG ACGGCGGCGT GGCCCGGATG AGTGATCCCC GGATGATCAA GGAGATCATT
GAGGCCGTCA CCATCCCGGT GATGGCGAAA GTCCGCATCG GCCACTTTGT GGAGGCGCAG
ATTCTGGAGG CCATCGGTGT GGACTTTATC GACGAGTCGG AGGTGCTCAC CCCCGCCGAC
GACCAGTACC ACATCGAGAA GACCCAATTC AGGGTGCCCT TTGTCTGCGG CGCCAAGAAC
CTGGGCGAGG CCCTGCGCCG CATTGGGGAG GGGGCCAGCA TGATCCGCAC CAAGGGCGAG
GCCGGGACCG GCAACATCAT CGAGGCGGTG CGCCACGCCC GCACGGTGCT GGGCGAGATC
CGCGCCATCC AGGCCCGCCC GAGTGACGAA TTGATGACGG TCGCCCGCGA CCTCCAGGCC
CCCTACCACC TGGTGCAGTA CGTTCACCGG CACGGCAAAC TGCCGGTGGT GAATTTCGCA
GCGGGCGGCG TCGCCACCCC CGCCGATGCG GCCCTGATGA TGCACCTGGG CCTCGACGGG
GTCTTTGTGG GCAGCGGCAT TTTCAAGAGT GACCACCCCG AGCGCCGCGC CCAGGCCATT
GTGAAGGCCG TCACCCATTA CCAGAACCCC GACGTGCTGG CCGAGATCAG CGAGGACCTC
GGTGCGCCGA TGACCGGCAT CAACATCGAC AGCTTGATTC CCGAACAGCG CCTGGCGGGG
CGCGGCTGGT GA
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| Protein sequence | MFYPLSMTEQ SQTGTTEIKR GFAEMFKGGV IMDVVTADQA RIAEAAGATA VMALERVPAD
IRKDGGVARM SDPRMIKEII EAVTIPVMAK VRIGHFVEAQ ILEAIGVDFI DESEVLTPAD
DQYHIEKTQF RVPFVCGAKN LGEALRRIGE GASMIRTKGE AGTGNIIEAV RHARTVLGEI
RAIQARPSDE LMTVARDLQA PYHLVQYVHR HGKLPVVNFA AGGVATPADA ALMMHLGLDG
VFVGSGIFKS DHPERRAQAI VKAVTHYQNP DVLAEISEDL GAPMTGINID SLIPEQRLAG
RGW
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