| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_1102 |
|---|
| Symbol | |
|---|
| ID | 4058972 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Deinococcus geothermalis DSM 11300 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008025 |
|---|
| Strand | + |
|---|
| Start bp | 1172882 |
|---|
| End bp | 1173622 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641230118 |
|---|
| Product | putative translaldolase |
|---|
| Protein accession | YP_604569 |
|---|
| Protein GI | 94985205 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0176] Transaldolase |
|---|
| TIGRFAM ID | [TIGR00875] fructose-6-phosphate aldolase, TalC/MipB family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.150753 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.00417913 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCAATTTT TCATCGACAC CGCGATCATT GACGAGGTCC GTGAAATCAA CCGCTGGGGT
GTGCTGTCGG GCGTCACCAC CAACCCCAGC CTGGTCGCCG CGTCGGGGCG CGACTTCAAG
GAAGTCATTC AGGAACTCGC CGCGTTGGTC GGTGGCGCGA TCAGCGCGGA GGCCACCGCC
CTTGACGCTG AGGGCATGAT CAAAGAAGGC CGCGAGTTTG CCAGTTGGAG CGAGCACGTT
GTCGTCAAGT TGCCGCTGAC TCCGGCGGGC CTGCAGGCCT GTCAGGCCCT AACCTCGGAG
GGCATCCGCA CCAACATCAC CCTGTGCTTC AGCGTGCCGC AGGCGCTGCT GGCGGCCCGG
GCCGGGGCCA GCTACATCAG CCCGTTTGCG GGCCGGGTGG ACGACATCGG CTGGGACGGC
ATCGAGCTGG TGCGCCAGAT CAAGGAAGCC TACGTGCTGG GGGACATTCC GACCAAGGTG
CTGGCTGCCT CGATTCGCCA CCCGCAGCAC GTGGTGCAGG CGGCGCTGGC GGGAGCCGAC
GTGGCGACCG TGCCCTACAA GGTCTTTACC CAGATGATCA AGCATCCCCT CACCCAGGCG
GGGCTCGATG CCTTTCTCCA GGACTGGGCG CGGCGCGCCG GGGCCAGTCC CGAAACGCCT
TCCAGCGAGG CAGGCAGCAA TCCCCAGCAG GGCGGCGTGA CCGCGCAGGG TGAACCGGTG
CAGGGAGGCC AGCGGCAGTG A
|
|---|
| Protein sequence | MQFFIDTAII DEVREINRWG VLSGVTTNPS LVAASGRDFK EVIQELAALV GGAISAEATA
LDAEGMIKEG REFASWSEHV VVKLPLTPAG LQACQALTSE GIRTNITLCF SVPQALLAAR
AGASYISPFA GRVDDIGWDG IELVRQIKEA YVLGDIPTKV LAASIRHPQH VVQAALAGAD
VATVPYKVFT QMIKHPLTQA GLDAFLQDWA RRAGASPETP SSEAGSNPQQ GGVTAQGEPV
QGGQRQ
|
|---|
| |