| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_1058 |
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| Symbol | secA |
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| ID | 4057843 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Deinococcus geothermalis DSM 11300 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008025 |
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| Strand | + |
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| Start bp | 1125658 |
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| End bp | 1128267 |
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| Gene Length | 2610 bp |
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| Protein Length | 869 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641230075 |
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| Product | preprotein translocase subunit SecA |
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| Protein accession | YP_604526 |
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| Protein GI | 94985162 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.981267 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCCGTG TCCTCAACAA AGTGTTTGAT ACCAACCAGC GCGACGTGCA GCGCATCGTG
AAAACGGTGG TGCAGCCGGT CAATGCGCTG GAAGAAGAAA CGATGAAAAT CGAAAATCTT
GCCGAGGCGT TTATGCGGCT GCGCCAGCGG GTGCAGGAGG GCGGTGAGTC GCTGGATGAC
GTGCTCGTGC CTGCTTTTGC CCTGATCCGG GAAGCGGGCC GCCGCGCGAT TGGCAAGCGG
CACTACGACG TGCAGCTCAT CGGCGGGACG GCCCTGCACC AAGGCCGCAT CGCGGAGATG
CGCACCGGTG AGGGCAAGAC CTTGGTTGCC ACGCTGGCGC TTGCGCTCAA CGCCTTGGAG
GGCAAGGGTG CCCACCTCGT CACCGTCAAC GATTACCTCG CCCGCGTCGG CGCCGAGGAA
ATGGGCCTGC TGTACCGCAC GCTGGGCCTC TCGGTCGGCC TGATCACCCG CGACATGCAG
CCGCACCAGC GCCAGGCCGC CTATGCCTGC GACATCACCT ACGTCACCAA CTCGGAGTTG
GGCTTTGACT ATCTGCGCGA CAATATGGCC CAGAGCCGCG AGCAGCTGGT GCTGCGCGCA
GATAATCCCC TGCACTACGC CATCGTCGAC GAGGTGGACT CCATCCTGAT CGATGAGGCC
CGCACGCCGC TGATTATCTC GGGCGCGGCC GAAAAGGCGA CCGACCTCTA TTACGTGTAC
GCCAAGCTGG TCAAGCGGCT TCAGCGCGGT GAACCCGCCG AACCCGGCAA GCGAACCGAG
CCGACCGGCG ACTACACCAT CGACGAGAAG GGCAAGCAGG TGCACCTGAC CGAGCAGGGC
ATCGCCAAGA TTGAGCGTCT GCTCTCGCTG GGTGACCTCT ACAGCCCGGA AAACATGGAC
AAAGCGCACA TGATCACCCA GGCGATTCGT GCGCGCGAGC TGTACCACCG CGAGAAGGAC
TACATCGTGA ACGCGGAGGG CGAGGTCGTC ATCATCGATG AGTTTACCGG TCGCAGCATG
CCAGGGCGCC GCTACGGAGA AGGTCTACAC CAAGCTATCG AAGCCAAGGA AGGCGTCAAG
ATCGAAAACG AGAACCAGAC GCTCGCCACG ATCACCTACC AGAACTTCTT CCGCCTGTAC
GACAAGTTCG CCGGGATGAC CGGCACCGCC AAGACCGAGG AAAAGGAGTT CCTCGACATC
TACGGCTCCG ACGTGCTGGT GATTCCCACC AACAAGCCGG TGATTCGTCA GGACGCTGAC
GACTTGGTGT ACCGCACCCG CATGGGCAAG TACCAGGCTG TCGTCGAGGA AGTCAAGCAG
ATGCACGCAA CCGGGCGGCC GATCCTGATC GGCACCGCGA GCATCGACAC CTCCGAGCAG
CTCAGCGCCC TGCTGAAGCA GGCTGGGATT CGCCACTCGG TTCTCAATGC CAAGTACGAG
GCGCAGGAGG CGAGCATCAT TGCGCAGGCG GGCCGCTCGG GCACCGTGAC AATCGCCACC
AACATGGCTG GGCGCGGAAC CGATATCATG TTGGGTGGCA ACGCGGAATT CATCCTGGGT
GAGGCCATCG AGCAGAATTT CGGCATCAGC CGCTTCACGC CCGAGGCGGA GGCATTTATC
AAGGCGATCG GCCGCGAGGA TCCCGAAGCG GTAACCCTGG GCCTGCGGAT TCCCGGCATG
ACCGAACAGT TCATTCGGCA GGCGCAGCAG CTCCAAAAGG ACATCATTGC TGACCGTGAG
CGCGTGCGAG AACTCGGCGG CCTGCATATC ATTGGCACCG AGCGCCACGA GTCGCGCCGC
ATCGACAACC AATTGCGCGG GCGTGCGGGT CGTCAGGGTG ACCCGGGGTC CAGTCGCTTT
TACGTGTCCT TTGAGGACGA CCTGATGCGC CTCTTTGCGA GTGACCGCGT GGTGGCCATG
ATGGACCGCC TGGGGATGGA TGACACCCAA CCCATCGAGG CCAAGATGGT GACTGGAGCG
ATCGAGCGCG CACAGGCCCG CGTGGAGGAT CGCAACTTCG GGATCCGCAA GCAGCTGCTG
GAGTTCGACA ACGTGATGAG CAAGCAGCGC GACATCATCT ACGCCCAGCG CCGCGAGGTG
CTGCTTGGCA CCGACGAGGA TGTGGAAGAA TCGACCGAGG GCATGATTGC GGACTTCACC
GAGATGCAGC TCGCCTTCTA CGCGCCCATC GACCAGCCCG CCGAAAGTTG GGACCTGGAG
ACACTGCGGA CCAACATGCT TGAGGCGGTA CCTCAGCTCG AGCACTACGA CTTCGAGGCG
CTGCGTCATA TGGCCCCAGA AGCTGCCCAC GCGCACCTGC TCGAAGCGGT GGCCGACGCC
TTTGACGCCC GCAAGGCCGA GCTTGGCCCG ACCATGCTCA ATAGCCTCGC GCGCTATGTC
CTGCTGCAGG TCGTCGACCA GCACTGGAAA GAACACCTGC ACGGGATGGA CGTGCTGAGG
CAGGGCATCG GCCTGCGCGG CTACGGCCAG CGCGACCCCT TCACCGAGTA CAAGTTCGAG
GCGACGAACA TGTTCAACGA CATGATTGAC AATCTCAAGG CGGACGTGAC CAAATTCATC
TTCCGCATGC AGTTCGGTCA GGCGAGCTGA
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| Protein sequence | MFRVLNKVFD TNQRDVQRIV KTVVQPVNAL EEETMKIENL AEAFMRLRQR VQEGGESLDD
VLVPAFALIR EAGRRAIGKR HYDVQLIGGT ALHQGRIAEM RTGEGKTLVA TLALALNALE
GKGAHLVTVN DYLARVGAEE MGLLYRTLGL SVGLITRDMQ PHQRQAAYAC DITYVTNSEL
GFDYLRDNMA QSREQLVLRA DNPLHYAIVD EVDSILIDEA RTPLIISGAA EKATDLYYVY
AKLVKRLQRG EPAEPGKRTE PTGDYTIDEK GKQVHLTEQG IAKIERLLSL GDLYSPENMD
KAHMITQAIR ARELYHREKD YIVNAEGEVV IIDEFTGRSM PGRRYGEGLH QAIEAKEGVK
IENENQTLAT ITYQNFFRLY DKFAGMTGTA KTEEKEFLDI YGSDVLVIPT NKPVIRQDAD
DLVYRTRMGK YQAVVEEVKQ MHATGRPILI GTASIDTSEQ LSALLKQAGI RHSVLNAKYE
AQEASIIAQA GRSGTVTIAT NMAGRGTDIM LGGNAEFILG EAIEQNFGIS RFTPEAEAFI
KAIGREDPEA VTLGLRIPGM TEQFIRQAQQ LQKDIIADRE RVRELGGLHI IGTERHESRR
IDNQLRGRAG RQGDPGSSRF YVSFEDDLMR LFASDRVVAM MDRLGMDDTQ PIEAKMVTGA
IERAQARVED RNFGIRKQLL EFDNVMSKQR DIIYAQRREV LLGTDEDVEE STEGMIADFT
EMQLAFYAPI DQPAESWDLE TLRTNMLEAV PQLEHYDFEA LRHMAPEAAH AHLLEAVADA
FDARKAELGP TMLNSLARYV LLQVVDQHWK EHLHGMDVLR QGIGLRGYGQ RDPFTEYKFE
ATNMFNDMID NLKADVTKFI FRMQFGQAS
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