Gene Dgeo_1048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_1048 
Symboltsf 
ID4057833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp1119792 
End bp1120601 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content64% 
IMG OID641230065 
Productelongation factor Ts 
Protein accessionYP_604516 
Protein GI94985152 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0264] Translation elongation factor Ts 
TIGRFAM ID[TIGR00116] translation elongation factor Ts 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0760308 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.318261 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGAAT CGATCAAGAA GCTGCGCGAG CTGACCGGCG CGGGCATGAT GGACGTGAAA 
AAGGCCCTGG CGGATGCCGG GAACGACGAA GAAAAAGCGA TTGCGCTGCT GCGCGAACGC
GGCATTGTCA AGGCCGCCAA GAAGGCCGAC CGCGAGGCGA AGGAAGGGCT GGTGCGCTTC
GTCGTGGACG GCAACAGGGC CGCGATGGTC GAGGTGAACA GCGAAACTGA CTTTGTCGCG
CGCAACTCTG ACTTCCAGGC ACTCGTCGAA CAGGTTGCGC AAGCGGCGCT GCGAGCCGGG
ACCAACAACG TTGAAGAGCT GCGCAACTTC ACGCTGGACA ATGGCGAGAC CGTTGGCAAC
GCTGTGGCGG CGGCGGCGGG CAAGATCGGC GAGAACCTGG TGCTCAACCG CGTGGCCTAC
ATTGACGCTG GCGAGGGCGA GCACGTGGCC GGGTACGTGC ACTCCAACGG CAAGATCGGC
GTGCTGGTGG ACCTCCTCGG CGGCACCGAG GCCCAGGCCA AGGATGTGGC GCTGCACGTG
GCGGCCGAGC GGCCTCAGTA CCTCAACCGC GACGAGGTGA ACGCCGCAGA CCTCGAAAAG
GAGCGCGAGA TCCTCACCAA CAAGGCGCTG AACGAGGGCA AGCCCCAACA GATCGTGGAC
AAGATCGTCC AGGGGCAGAT CGGCAAGTTC TACGAGGAGC GCGTGCTGCC CGAGCAGAAG
TTCGTGAAGG ACAACAGCGT GACCGTGGGA CAGTACCTGG GGAACGCTCA GGTCAAGCGC
TTCGTGCGCT TTGAGGTCGG CGCGCAATGA
 
Protein sequence
MMESIKKLRE LTGAGMMDVK KALADAGNDE EKAIALLRER GIVKAAKKAD REAKEGLVRF 
VVDGNRAAMV EVNSETDFVA RNSDFQALVE QVAQAALRAG TNNVEELRNF TLDNGETVGN
AVAAAAGKIG ENLVLNRVAY IDAGEGEHVA GYVHSNGKIG VLVDLLGGTE AQAKDVALHV
AAERPQYLNR DEVNAADLEK EREILTNKAL NEGKPQQIVD KIVQGQIGKF YEERVLPEQK
FVKDNSVTVG QYLGNAQVKR FVRFEVGAQ