Gene Dgeo_1016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_1016 
Symbol 
ID4058152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp1089765 
End bp1092194 
Gene Length2430 bp 
Protein Length809 aa 
Translation table11 
GC content64% 
IMG OID641230034 
ProductDNA gyrase, A subunit 
Protein accessionYP_604485 
Protein GI94985121 
COG category[L] Replication, recombination and repair 
COG ID[COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit 
TIGRFAM ID[TIGR01063] DNA gyrase, A subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.25895e-05 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value3.78482e-08 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGACTGGAA TCCATCCCGT TGACATCACC AGCGAAGTCA AGACCAACTT CATCAATTAC 
GCGATGAACG TGATTGTGGA CCGCGCGCTC CCCGACGTTC GCGACGGTCT CAAGCCGGTG
CAGCGCCGAA TCATGTACGC GATGCTGCAA GAAGGCCTCG CCTCCAACCA GAAGCACGCC
AAGTCGGCGG CGGTGGTGGG CGAGGTGATG AAGAAGTACC ACCCGCACGG CGACGCCTCG
ATCTACGACG CGATGGTCCG GCTGGGCCAG TGGTGGAACA TGCGCTACAC CCTGGTGGAT
CCTCAGGGCA ACTTCGGCTC GATCGACGGC GACCCGCCCG CCGCCATGCG CTACACCGAA
GCGCGCATGA CCAAGATCGC GGAGGAGGTG CTGGCCGACC TCGAAAAGGA GACGGTCCTC
CTCAAGCCCA ACTACGACGA GACGACCGTG GAACCGGCGG TGCTGCCATC GGCGGTGCCG
AACCTGCTGA TCAACGGTGC GGCGGGCATC GCGGTGGGCA TGGCGACGAA CATCCCGCCG
CACAACCTCA CCGAGATCAG CAACGGGCTG CTCGCCCTGA TCGACAAGCC CGACATCACG
CTCGACGAGA TGATGACGCA CGTTCTAGGG CCGGATTTTC CGACCGGCGG CCGCATCTCG
CGGCAGGGCA TCCGTGAGGC GTATGCCACC GGACACGCCG GGCTGAAGGT GCGCGGCAAG
GCCCGGATTG ATGAGAAGAA CGGGCGGGCG CAGATCGTGA TCACGGAAAT CCCGTATCAG
GTCAACAAGA CCAATCTGAT CCAGACGATC AGCGCGATGT ACAAGGCCGG GAAGATTCCC
GACATCTCCG CCCTGCGCGA TGAGTCCGAT CGCAAGGAAC CGGTGCGCAT TGTCGTGGAG
CTGAAGCGCG GCGCGATTCC CACGCTGGTC CTGAACCAGC TCTACAAGTA CACCCAGCTT
CAGAGCACCT TCACAGTGAT GAATCTCAGC ATCGTGAACG GCGAGCCGCG GGTGCTGCCG
CTGATCGATA CCATGCGCGC CTTCCTCGAT CACCGCCGCG ACGTGGTGAC CCGGCGCACA
CAGTACGACC TGAAGAAGGC TGAAGAACGC GCCCACATCC TGGAAGGGTT GATCAAGGCG
CTCGACCACA TCGACGAGGT GATTGAGCGC ATCCGGGCCA GCAACACGGC GGCCGAGGCC
CGCGACGCCC TGATGCAGCG CTTCACGCTG ACCGAGATTC AGGCCCAGGC GATCCTGGAC
ATGCGCCTCC AGCGCTTGGT GGGGCTGGAA CGCGAGAAGC TCGTGGCCGA GTACGACGAA
CTGCAGAAGG TGATTGCCCG GCTGCGCTCG ATCCTGGGTG ACGAGCGGCT GCTGTGGCGC
GAGATCAAGA AGGAAATCCG CGATATCCGC GACCGCTACG GTGACGAGCG CCGCTCGACG
ATCACTGACC TGGAAGACGA CATCTCCAAG GAAGACCTGA TTGCCGTCGA GGACATGGTC
ATCACCATGA CGAAGGCGGG GTACCTCAAG CGCACCAAGC TGGATGCCTA CCGGGCACAG
AGCCGCGGCG GACGTGGCGC GAGCGGGGGG CGGCTGCGCG AGGAGGATGC GAACACCAGG
GTCTTTGTGG GATCCACGCA CGACTACCTG CTGTTCTTCA CAGATCAGGG CCGCGTCTTC
CACGAGAAGA TCTACGACCT GCCGGAGGCG GGACGCGACG CAAAGGGAAC CCACATCCGC
AACCTGATTC CTGCGCTTCG CGAAGACGAA AACATCGCCT CGGTGCTGAG CGTGAAAGGC
TTCAACGAGC CGGGTTCCTT TGTCTTTGCC ACCAAGCGCG GCATGGTCAA AAAGACCCTG
ATCACCGAGT ACGGCAACAT CACCTCGGCG GGCCTGATTG CCATCAACCT GCAGCCTGGC
GACGAACTGA TCGGCGTGGA TATCCAGCGC GACGGGGACG ACGTGGTACT GGCGACCAAG
GAGGGCCAGG CCATGCGCTT TGCGGCCACT GAGGTGCGCG ACACTGGCCG CGCGACCCAA
GGCGTGATTG GGATCCGCCT GCGCGAGGGC GACGAGGTGG TCAGCATGGC GCTGGTGCCG
AGCGGCGAGG AGAGCAGCGA ACTGCTCGCG ATCAGCGAGT GCGGCCTGGG CAAACGCACC
CCAGTCAGCG ACTACCCCAG CAAGGGGCGC GGTGGCCTGG GCGTGATCAC GCTGGACGTG
ACCGACAAGA CCGGCAAGCT GGTCGCGCTC ACCCACGTGG CCGGAAACGA GGAATTGATG
GTGCTCACCG AAAAGGGCAC CGTGATTCGC ACGCGCGTCG AGGAGGTCCG GGTCACCGGC
CGCAACGCGC AGGGCGTGAA GGTGATCAAC CTCGGAGAAA AGGACCGCGT AATCAGCGCC
TTCCCGATCC GCCGCGAGGA CGAACTGTAA
 
Protein sequence
MTGIHPVDIT SEVKTNFINY AMNVIVDRAL PDVRDGLKPV QRRIMYAMLQ EGLASNQKHA 
KSAAVVGEVM KKYHPHGDAS IYDAMVRLGQ WWNMRYTLVD PQGNFGSIDG DPPAAMRYTE
ARMTKIAEEV LADLEKETVL LKPNYDETTV EPAVLPSAVP NLLINGAAGI AVGMATNIPP
HNLTEISNGL LALIDKPDIT LDEMMTHVLG PDFPTGGRIS RQGIREAYAT GHAGLKVRGK
ARIDEKNGRA QIVITEIPYQ VNKTNLIQTI SAMYKAGKIP DISALRDESD RKEPVRIVVE
LKRGAIPTLV LNQLYKYTQL QSTFTVMNLS IVNGEPRVLP LIDTMRAFLD HRRDVVTRRT
QYDLKKAEER AHILEGLIKA LDHIDEVIER IRASNTAAEA RDALMQRFTL TEIQAQAILD
MRLQRLVGLE REKLVAEYDE LQKVIARLRS ILGDERLLWR EIKKEIRDIR DRYGDERRST
ITDLEDDISK EDLIAVEDMV ITMTKAGYLK RTKLDAYRAQ SRGGRGASGG RLREEDANTR
VFVGSTHDYL LFFTDQGRVF HEKIYDLPEA GRDAKGTHIR NLIPALREDE NIASVLSVKG
FNEPGSFVFA TKRGMVKKTL ITEYGNITSA GLIAINLQPG DELIGVDIQR DGDDVVLATK
EGQAMRFAAT EVRDTGRATQ GVIGIRLREG DEVVSMALVP SGEESSELLA ISECGLGKRT
PVSDYPSKGR GGLGVITLDV TDKTGKLVAL THVAGNEELM VLTEKGTVIR TRVEEVRVTG
RNAQGVKVIN LGEKDRVISA FPIRREDEL