| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_0886 |
|---|
| Symbol | sdhB |
|---|
| ID | 4057810 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Deinococcus geothermalis DSM 11300 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008025 |
|---|
| Strand | - |
|---|
| Start bp | 946691 |
|---|
| End bp | 947452 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641229906 |
|---|
| Product | succinate dehydrogenase iron-sulfur subunit |
|---|
| Protein accession | YP_604357 |
|---|
| Protein GI | 94984993 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
|---|
| TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGAAG TTTCTTCTGC TCCCGCCAGC AACGCCGCCC AGGACGTAGC GATGCTGCGG
ATCAATGTCA AGATCCTGCG CTTTGATCCA GAAAAGGACC GCAAAGCCCA CTGGAAAATG
TATTCGGTTG AGGCGCAACC CGGCGACCGC GTGCTGGACG TGATCAACTG GGTGAAGTGG
TACATCGACC CCTCGCTCAC CTTCCGCCGC TCCTGCGGAC ACGGCATCTG TGGCAGCGAC
GCGATGATGA TCAACGGGCG CAACCGTCTG GCCTGCAAGA CGCTGGTGCG CGACGTGGCA
AAAGACGGCG GCACCATCAC CGTCGAGCCT ATTCGCGGAC TCAAGGTTGA GAAGGACCTG
CTGGTGGACA TGGACCCCTT CTTCGATGCG TACCGGGCGA TCATGCCCTA CTTCATCAAC
GAGGATCCGC CGCCCCCCGC CGAGCGGCTC CAGTCGCCCG AGCAGATCGA CCGGATCAGC
CACTCCAGCA ACTGCATCCT GTGCGCGTGC TGCACCACCT CCTGCCCGAT CTTCTGGGTG
AATGGCTCGT ACCTGGGGCC GGCGGCCATT GTGCAGGCGC ACCGCTTCAT CTTCGACAGC
CGCGACCAGG CGACCAACCA GCGGCTGAAC ATCATGAACC AGAACACCGG CGTCTGGCGC
TGCCGCACCG CCTACAACTG CACTGAGGCG TGTCCACGCG ACATCCCGAT CACTACGATC
ATCGAGGAGG TCAAGCGCGC GGTGATGTAC CAGCAGGCGT AA
|
|---|
| Protein sequence | MPEVSSAPAS NAAQDVAMLR INVKILRFDP EKDRKAHWKM YSVEAQPGDR VLDVINWVKW
YIDPSLTFRR SCGHGICGSD AMMINGRNRL ACKTLVRDVA KDGGTITVEP IRGLKVEKDL
LVDMDPFFDA YRAIMPYFIN EDPPPPAERL QSPEQIDRIS HSSNCILCAC CTTSCPIFWV
NGSYLGPAAI VQAHRFIFDS RDQATNQRLN IMNQNTGVWR CRTAYNCTEA CPRDIPITTI
IEEVKRAVMY QQA
|
|---|
| |