| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_0864 |
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| Symbol | |
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| ID | 4057983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Deinococcus geothermalis DSM 11300 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008025 |
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| Strand | + |
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| Start bp | 922097 |
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| End bp | 923878 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641229884 |
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| Product | GTP-binding protein TypA |
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| Protein accession | YP_604335 |
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| Protein GI | 94984971 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU
[TIGR01394] GTP-binding protein TypA/BipA |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.490555 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATACC GCAACATCGC CATTATCGCT CACGTCGACC ACGGCAAGAC CACGCTCGTG
GACGGCATGC TCAAGCAGAC GCTCGAACTC AAGCACGGCG AGGAGATCGC TGAACGCGCG
ATGGACTCCA ACGACCTCGA ACGCGAGCGC GGCATCACCA TTCTCGCCAA GAACACGGCG
GTCGAGTACA AGGGCGTCAA GATCAACATC GTGGACACGC CCGGCCACGC CGATTTTGGC
GGCGAGGTAG AGCGCGTGCT GGGCATGGTG GACGGCGCCC TCGTCCTCGT GGACGCGGCG
GAGGGGCCGA TGCCTCAGAC CCGCTTCGTG CTGCGCAAGG CGATTGAACT GGGCCTCAAG
CCCATCGTGG TGGTCAACAA GATCGACCGC CAGGACGCTC GCCCGGAAGA GGTCGTCAAC
CTCACCTTCG ACCTGATGGC CGAACTGGGT GCGAACGAGG ATCAGCTCGA CTTCCCGATT
CTGTACGCCG TTGCGCGAGA AGGCAAGGCG TTCCGCGACC TGGAGAACCC TCAACCCGAC
ATGCACGAGC TGTTCGACAT GGTGCTGGAG CACATCCCGG CGCCGCAGGT GGACCTGGAC
GCGCCCTTCC AGATGCTTGT CACCAACCTC GATTACAACG AATATCTGGG CCGTATCGTG
TTGGGGCGGG TGCAGCGCGG CCGGGTGAAG AAGGGCGAGT TCGTCAACCT GATCCACAAA
GACGGCACGA TGACGAAGAC CCGAGTCATT CAGCCGTTCA CCCACCTGGG CCTGCGCCGC
ATCGAGGTCG ACGAGGTGAG CGCCGGGGAC ATCGTGGCGC TCGCCGGAAT CGAGGACGCG
CAAATCGGGG AGACCGTGGC GGATCTCGCC GACCCCGAGG CGCTGCCAAT CATCACCGTG
GACGAGCCTA CGGTCAGCAT GATCTTCCAG CCCAACACCA GCCCCTTCGC CGGGAAGGAA
GGCAAGTACG TCACCTCTCG CCACCTGAAT GACCGCCTGA AGCGCGAGGT CATGACCAAT
GTGTCCCTCA AGGTGGAGGA AATCCGCCCC GACGAGTTCA AGGTGTCGGG CCGCGGCGAG
CTCCACCTCT CCATCCTGCT GGAAACCATG CGCCGCGAGG GCTATGAGGT GCAGGTGGGT
GCGCCGCAGG TGATTACCCG CGAGATTGAC GGCGTGAAGC ATGAGCCGAT TGAGCACCTC
GTCATTGACG TTCCTGAGCA GTTTGCCAGC AGCGTGATTG GCGTGCTGGG CGCGCGCAAG
GGCCAGATGG TGAACATGGA GCCGCAGGGG AGCCGCGTGC GCGTGGAATT CAAGATTCCC
TCCCGCGCGC TTTTCGGTTT CCGCACCCAG TTCCTCTCGA TGACCCAGGG CGAGGGCATC
ATGAGCCACA TTTTCGATGG GTACGCGCCG TGGGCCGGAG AACTCAAGAC CCGCCAGAAT
GGTTCTCTGG TCAGCATGGA AGACGGTGTG GCCTTTGCCT ACTCGATCTT CAAGCTTCAG
GACCGCGGGA CTTTCTTCAT CGAACCCGGT CAGGACGTGT ACGTGGGGAT GATTGTGGGT
GAGAACGCCC GCGAACAGGA CATGAACGTG AACGTCTGCA AGAACAAGAA GCTCACGAAC
ATCCGTTCGG CAGGGGCAGA TGAGGCGCTC ACCCTGACGC CGCCCCGGCG CCTCAGCCTG
GAAGACGCGC TGGAATACAT CGCGGATGAT GAACTGGTGG AACTCACGCC GCAGAGCATC
CGTCTGCGCA AAAAGATTCT GAACCCGAGC TTCAGGAAGT AA
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| Protein sequence | MEYRNIAIIA HVDHGKTTLV DGMLKQTLEL KHGEEIAERA MDSNDLERER GITILAKNTA
VEYKGVKINI VDTPGHADFG GEVERVLGMV DGALVLVDAA EGPMPQTRFV LRKAIELGLK
PIVVVNKIDR QDARPEEVVN LTFDLMAELG ANEDQLDFPI LYAVAREGKA FRDLENPQPD
MHELFDMVLE HIPAPQVDLD APFQMLVTNL DYNEYLGRIV LGRVQRGRVK KGEFVNLIHK
DGTMTKTRVI QPFTHLGLRR IEVDEVSAGD IVALAGIEDA QIGETVADLA DPEALPIITV
DEPTVSMIFQ PNTSPFAGKE GKYVTSRHLN DRLKREVMTN VSLKVEEIRP DEFKVSGRGE
LHLSILLETM RREGYEVQVG APQVITREID GVKHEPIEHL VIDVPEQFAS SVIGVLGARK
GQMVNMEPQG SRVRVEFKIP SRALFGFRTQ FLSMTQGEGI MSHIFDGYAP WAGELKTRQN
GSLVSMEDGV AFAYSIFKLQ DRGTFFIEPG QDVYVGMIVG ENAREQDMNV NVCKNKKLTN
IRSAGADEAL TLTPPRRLSL EDALEYIADD ELVELTPQSI RLRKKILNPS FRK
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