Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dgeo_0851 |
Symbol | |
ID | 4057970 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Deinococcus geothermalis DSM 11300 |
Kingdom | Bacteria |
Replicon accession | NC_008025 |
Strand | - |
Start bp | 910513 |
End bp | 911445 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641229871 |
Product | proline dehydrogenase |
Protein accession | YP_604322 |
Protein GI | 94984958 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0506] Proline dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.435625 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.094276 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGACC AGCTCTACCG CAAAGCCGTC CTGACCGTCT CGGGACAGAA GTTCGTGGAA AACCTCGTTC GCGCGCGGGG CTGGGGGGTG GCCCAGCGCT TCGTGGCGGG GGAGGACGCC GCCTCCGCCC TCCAGGCTGT CCGCGAGCTG GAAGGTGACG GCATCCTGGG GAATCTGGAC CTGCTGGGCG AGTTCATCGA CTCGCCGGAA CAGTGCAACG CCTTTGCGGA ACGGGTGCTG AGCCTGCTTG ACCAGGCGAA CGCCGCCGGA ATCCGGCCCT ATGTCAGCAT CAAGCTCTCC AGCGTCGGGC AGGGACAGAC CGTGAACGGC GAAGATCTCG GCCTAAGCAA CGCCCGCCGG ATCGTGGGCC GGGCGAAGGG GTACGGCGGC TTCGTGTGCC TGGACATGGA GGACCACACC CGCGTGGACC TCACGCTGGC CCAGTTCCGC ACGCTGGTGA ACGAGTTCGG CAATGCGTTT GTCGGAACCG TGCTACAAAG CTACCTCTAC CGTTCGGAGG CCGACCTCGC CGCCCTGGGA GACCTGCGTC CCAACCTGCG CATCGTCAAG GGGGCTTACC TCGAACCCGC GACGGTCGCC ATGCCCGACA AGGCCGATGT GGACGCCAGT TATCGCCGCC TGGTGTACGC CCAGATGAAG GCGGGCCATT ACGTCAACGT TGCCACGCAC GACGAGCGCA TCATCGAGGA CGTGAAGCAT TTCGTGCTTG CACACGGGAT CAGCAAGGAC GCCTTCGAGT TCCAGATGCT CTACGGGATC CGCCGCGACC TTCAGAAAGA GCTGGCCCAG CAGGGCTACC GCGTCCGCGC CTACATCCCC TACGGGCGCG ACTGGTACCC GTACTTTGCC CGCCGCATTG CCGAAACCCC GCGCAATGCC CTCTTCGTGC TGCGCGGGAT GCTGAAGGGG TAG
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Protein sequence | MIDQLYRKAV LTVSGQKFVE NLVRARGWGV AQRFVAGEDA ASALQAVREL EGDGILGNLD LLGEFIDSPE QCNAFAERVL SLLDQANAAG IRPYVSIKLS SVGQGQTVNG EDLGLSNARR IVGRAKGYGG FVCLDMEDHT RVDLTLAQFR TLVNEFGNAF VGTVLQSYLY RSEADLAALG DLRPNLRIVK GAYLEPATVA MPDKADVDAS YRRLVYAQMK AGHYVNVATH DERIIEDVKH FVLAHGISKD AFEFQMLYGI RRDLQKELAQ QGYRVRAYIP YGRDWYPYFA RRIAETPRNA LFVLRGMLKG
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