Gene Dgeo_0851 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_0851 
Symbol 
ID4057970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp910513 
End bp911445 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content65% 
IMG OID641229871 
Productproline dehydrogenase 
Protein accessionYP_604322 
Protein GI94984958 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0506] Proline dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.435625 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.094276 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGACC AGCTCTACCG CAAAGCCGTC CTGACCGTCT CGGGACAGAA GTTCGTGGAA 
AACCTCGTTC GCGCGCGGGG CTGGGGGGTG GCCCAGCGCT TCGTGGCGGG GGAGGACGCC
GCCTCCGCCC TCCAGGCTGT CCGCGAGCTG GAAGGTGACG GCATCCTGGG GAATCTGGAC
CTGCTGGGCG AGTTCATCGA CTCGCCGGAA CAGTGCAACG CCTTTGCGGA ACGGGTGCTG
AGCCTGCTTG ACCAGGCGAA CGCCGCCGGA ATCCGGCCCT ATGTCAGCAT CAAGCTCTCC
AGCGTCGGGC AGGGACAGAC CGTGAACGGC GAAGATCTCG GCCTAAGCAA CGCCCGCCGG
ATCGTGGGCC GGGCGAAGGG GTACGGCGGC TTCGTGTGCC TGGACATGGA GGACCACACC
CGCGTGGACC TCACGCTGGC CCAGTTCCGC ACGCTGGTGA ACGAGTTCGG CAATGCGTTT
GTCGGAACCG TGCTACAAAG CTACCTCTAC CGTTCGGAGG CCGACCTCGC CGCCCTGGGA
GACCTGCGTC CCAACCTGCG CATCGTCAAG GGGGCTTACC TCGAACCCGC GACGGTCGCC
ATGCCCGACA AGGCCGATGT GGACGCCAGT TATCGCCGCC TGGTGTACGC CCAGATGAAG
GCGGGCCATT ACGTCAACGT TGCCACGCAC GACGAGCGCA TCATCGAGGA CGTGAAGCAT
TTCGTGCTTG CACACGGGAT CAGCAAGGAC GCCTTCGAGT TCCAGATGCT CTACGGGATC
CGCCGCGACC TTCAGAAAGA GCTGGCCCAG CAGGGCTACC GCGTCCGCGC CTACATCCCC
TACGGGCGCG ACTGGTACCC GTACTTTGCC CGCCGCATTG CCGAAACCCC GCGCAATGCC
CTCTTCGTGC TGCGCGGGAT GCTGAAGGGG TAG
 
Protein sequence
MIDQLYRKAV LTVSGQKFVE NLVRARGWGV AQRFVAGEDA ASALQAVREL EGDGILGNLD 
LLGEFIDSPE QCNAFAERVL SLLDQANAAG IRPYVSIKLS SVGQGQTVNG EDLGLSNARR
IVGRAKGYGG FVCLDMEDHT RVDLTLAQFR TLVNEFGNAF VGTVLQSYLY RSEADLAALG
DLRPNLRIVK GAYLEPATVA MPDKADVDAS YRRLVYAQMK AGHYVNVATH DERIIEDVKH
FVLAHGISKD AFEFQMLYGI RRDLQKELAQ QGYRVRAYIP YGRDWYPYFA RRIAETPRNA
LFVLRGMLKG