Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dgeo_0731 |
Symbol | |
ID | 4059092 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Deinococcus geothermalis DSM 11300 |
Kingdom | Bacteria |
Replicon accession | NC_008025 |
Strand | - |
Start bp | 792394 |
End bp | 793104 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641229750 |
Product | ABC transporter related |
Protein accession | YP_604202 |
Protein GI | 94984838 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.346803 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCACTGC TGGAAGTGGA GCATCTCAGC GTGAACTACG GCGCGATTCA GGCCGTCCGC CACCTCACAC TGACGGTGAA CGAGGGGGAG ATCGTCACCC TGATCGGGGC CAACGGGGCA GGCAAAACGA CCACGCTGCG GGCGATCTCA CGGCTGGTGC GCTCGCGCGA GGGGCGCATT CTCTTTGCTG GGCGCGACAT CACCCGCGCC ACGCCGGACG AGGTGGTGCG GCTCGGCGTG GCGCAGAGTC CCGAAGGGCG GCAGGTGCTG GCACGCCAGA GCGTGCAGGA CAACCTAGAA CTCGGTGCCT ATATCCGCCG GGATGCGAGT GAGGTGCGAG CCGACATCGC GCGGATGTAC GAACGTTTTC CTCGCCTGGG CGAGCGCCGT CACCAGCTCG CGGGCACCCT CTCCGGCGGC GAACAGCAGA TGCTTGCCAT CGCCCGCGCG CTGATGAGCC GCCCGCGGTT GCTGCTGCTC GACGAACCCT CGCTGGGCCT CGCGCCCATC ATCGTGCGTG AAATCTTCGA CATCATCGGC GAACTGAACG CGGGCGGCAC CACGATCCTG TTGGTCGAAC AAAACGCCCG CCTCGCCATG GGACGCAGCG ACCGGACCTA CGTGCTGGAG GCCGGACAAC TGACGCTACA GGGCGACAGC GCGCGGCTGG TGAACGACGA GCGGGTGCTG CACGCCTATC TAGGGGGATA G
|
Protein sequence | MALLEVEHLS VNYGAIQAVR HLTLTVNEGE IVTLIGANGA GKTTTLRAIS RLVRSREGRI LFAGRDITRA TPDEVVRLGV AQSPEGRQVL ARQSVQDNLE LGAYIRRDAS EVRADIARMY ERFPRLGERR HQLAGTLSGG EQQMLAIARA LMSRPRLLLL DEPSLGLAPI IVREIFDIIG ELNAGGTTIL LVEQNARLAM GRSDRTYVLE AGQLTLQGDS ARLVNDERVL HAYLGG
|
| |