Gene Dgeo_0731 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_0731 
Symbol 
ID4059092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp792394 
End bp793104 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content67% 
IMG OID641229750 
ProductABC transporter related 
Protein accessionYP_604202 
Protein GI94984838 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.346803 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACTGC TGGAAGTGGA GCATCTCAGC GTGAACTACG GCGCGATTCA GGCCGTCCGC 
CACCTCACAC TGACGGTGAA CGAGGGGGAG ATCGTCACCC TGATCGGGGC CAACGGGGCA
GGCAAAACGA CCACGCTGCG GGCGATCTCA CGGCTGGTGC GCTCGCGCGA GGGGCGCATT
CTCTTTGCTG GGCGCGACAT CACCCGCGCC ACGCCGGACG AGGTGGTGCG GCTCGGCGTG
GCGCAGAGTC CCGAAGGGCG GCAGGTGCTG GCACGCCAGA GCGTGCAGGA CAACCTAGAA
CTCGGTGCCT ATATCCGCCG GGATGCGAGT GAGGTGCGAG CCGACATCGC GCGGATGTAC
GAACGTTTTC CTCGCCTGGG CGAGCGCCGT CACCAGCTCG CGGGCACCCT CTCCGGCGGC
GAACAGCAGA TGCTTGCCAT CGCCCGCGCG CTGATGAGCC GCCCGCGGTT GCTGCTGCTC
GACGAACCCT CGCTGGGCCT CGCGCCCATC ATCGTGCGTG AAATCTTCGA CATCATCGGC
GAACTGAACG CGGGCGGCAC CACGATCCTG TTGGTCGAAC AAAACGCCCG CCTCGCCATG
GGACGCAGCG ACCGGACCTA CGTGCTGGAG GCCGGACAAC TGACGCTACA GGGCGACAGC
GCGCGGCTGG TGAACGACGA GCGGGTGCTG CACGCCTATC TAGGGGGATA G
 
Protein sequence
MALLEVEHLS VNYGAIQAVR HLTLTVNEGE IVTLIGANGA GKTTTLRAIS RLVRSREGRI 
LFAGRDITRA TPDEVVRLGV AQSPEGRQVL ARQSVQDNLE LGAYIRRDAS EVRADIARMY
ERFPRLGERR HQLAGTLSGG EQQMLAIARA LMSRPRLLLL DEPSLGLAPI IVREIFDIIG
ELNAGGTTIL LVEQNARLAM GRSDRTYVLE AGQLTLQGDS ARLVNDERVL HAYLGG