Gene Dgeo_0504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_0504 
Symbol 
ID4057935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp523467 
End bp524021 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content66% 
IMG OID641229516 
Productbifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase 
Protein accessionYP_603975 
Protein GI94984611 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2065] Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0748289 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGTGA CGCCCAAGGC CACTATTTTG ACCGCCGAGG AACTGCGCCG GGCGCTCACC 
CGCATCGCGC ACGAGATCAT CGAGCGCAAC AAGGGGGCAG AGAATCTCGC GCTGATCGGG
ATTCACACGC GCGGAATTCC GCTGGCCCAG CGGCTGGCGG AGAAACTGGG TGACCTGGAA
GGCGTGAACG TGCCGACCGG GATGCTCGAC ATCACGCTGT ACCGCGATGA CCTCTCGGAA
GTCGCCCATC AGCCGATCAT CCGCGAGACG CACGTGCCCT TCGATCTAGG GCAGCGCCGG
GTGGTGCTGG TGGACGATGT GCTGTTTACC GGACGCACCG TGCGCGCCGC ACTCGACGCC
CTGATTGACC TGGGCCGCCC GGCAGGCATC CAGCTGGCCG TCTTGGTGGA CCGCGGACAC
CGTGAACTCC CCATCCGTGC GGATTACGTC GGCAAGAACC TGCCCACGTC ACGCAGCGAG
ATGGTCAAGG TGCGGCTCGC GGAGACGGAC GGCGTGGACC TGGTGGAACT GCACGATCTG
GAGGAGCGGA GATGA
 
Protein sequence
MPVTPKATIL TAEELRRALT RIAHEIIERN KGAENLALIG IHTRGIPLAQ RLAEKLGDLE 
GVNVPTGMLD ITLYRDDLSE VAHQPIIRET HVPFDLGQRR VVLVDDVLFT GRTVRAALDA
LIDLGRPAGI QLAVLVDRGH RELPIRADYV GKNLPTSRSE MVKVRLAETD GVDLVELHDL
EERR