Gene Dgeo_0499 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_0499 
Symbol 
ID4057930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp519181 
End bp519642 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content67% 
IMG OID641229511 
ProductBadM/Rrf2 family transcriptional regulator 
Protein accessionYP_603970 
Protein GI94984606 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.1941 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGGTCT CGACCAAAGC ACAGTACGGC CTGCGCGCCC TGATCGAGAT CGGGCGGCGG 
GGTGGTGAGG CTGTGCCGCT CAAGGACGTC TCGGAGCGGC AGGGCATCAG CCAGCACTAT
CTGGAGCAGA TCGCCAGCAA CCTGCGCCGG GCAGGCTTCA TCAAGAGTGT TCGGGGCGCA
CATGGCGGCT ATCGGCTGGC CCGGCCCGCC TCTGCCATCA ACGCCTACGA GGTGGTGACC
GCCATGGAGG GCAGCATCGC GCCGGTCTCG TGCGTGGAGG AAGATCACGT CTGCGACAAG
GGCAACGTCT GCGGCACGCT GGAGCTGTGG CACCGCGTGG ACACGGCCCT GCGCGACGTG
CTGGGTGCAA CCACCCTGGC CGACCTGATC GCGGACAGTG AGCGGCAGGA ACACGCCCGG
CTCCTGCAAC TGGAGCCACG AGGGTCTGCG CTCAACGTGT GA
 
Protein sequence
MWVSTKAQYG LRALIEIGRR GGEAVPLKDV SERQGISQHY LEQIASNLRR AGFIKSVRGA 
HGGYRLARPA SAINAYEVVT AMEGSIAPVS CVEEDHVCDK GNVCGTLELW HRVDTALRDV
LGATTLADLI ADSERQEHAR LLQLEPRGSA LNV