| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_0449 |
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| Symbol | tdh |
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| ID | 4059162 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Deinococcus geothermalis DSM 11300 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008025 |
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| Strand | + |
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| Start bp | 461925 |
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| End bp | 463010 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641229461 |
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| Product | L-threonine 3-dehydrogenase |
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| Protein accession | YP_603921 |
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| Protein GI | 94984557 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
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| TIGRFAM ID | [TIGR00692] L-threonine 3-dehydrogenase
[TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.333655 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCCC CTTCTCGCCT TCCCAACATG CCCACTGTGC CCACCACCAT GAAGGCCCTC
AGCAAACAGG AAGCTCGCCC GGGCCTTTGG ATGATCGAAA CCGAGGTGCC CACGCCCGGC
CCCAATGATC TGCTGATTCG CGTGAAGAAC AGCTCCATCT GCGGCACGGA TGTCCATATC
TACAGGTGGG ACGAGTGGGC GCAGAAGACC ATTCCTGTTC CGATGGTGGT CGGCCACGAG
TATGTGGGTG TGGTGGCCGG GATGGGCAGT GAGGTGCGCG GCTTTGAGAT CGGTGACCGC
GTGAGCGGAG AGGGCCACGT CACCTGCGGC CACTGCCGCA ACTGCCGCGC AGGCCGCCGC
CACCTCTGCC GCAACACGCT GGGGGTGGGT GTCAACCGGC CCGGCTCCTT TGCGGAATAT
CTCGTGTTGC CCGCCTTCAA CGCCTTTAAG ATTCCCGACG ACATCCCCGA CGAGATCGCC
GCGATCTTTG ATCCCTTTGG CAACGCGGTC CACACCGCCC TCAGCTTTGA TCTGGTGGGC
GAAGATGTGC TGATCACCGG CGCAGGGCCA ATCGGTGTGA TGGCCGCCGC TGTCGCGCGG
CATGTGGGCG CGCGCAACGT GGTCGTGACC GACGTGAACG ACTACCGCCT GGACCTCGCC
CGCCGGATGG GCGCCACCCG CGCCGTGAAT GTCGCACGTG AGGACCTCTG GGAAGTCGCC
CGCTCGGAGC TGGGCATGAC GGAGGGCTTT GACGTGGGGA TGGAGATGAG CGGGAGCGGT
GCCGCCTTCG CGCAGATGAT CCGCGTGATG AACAACGGCG GCAAAATCGC CATCCTGGGC
ATTCCCTCCG GGCACGTGGA CATCGACTGG AACGACGTGA TCTTCAAGGG TCTGACCCTC
AAGGGCATCT ATGGCCGCGA GATGTTCGAG ACGTGGTACA AGATGACGGC CCTGATCCAG
TCGGGCCTGG ACCTCACGCC CGTGCTGACG CACCGTTTCG GCATCGACGA CTACCAGAAG
GGCTTCGACG CGATGCTGGG CGGGCAGAGC GGCAAGGTGA TTCTGGACTG GGAGGCGGGG
GTCTAG
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| Protein sequence | MTAPSRLPNM PTVPTTMKAL SKQEARPGLW MIETEVPTPG PNDLLIRVKN SSICGTDVHI
YRWDEWAQKT IPVPMVVGHE YVGVVAGMGS EVRGFEIGDR VSGEGHVTCG HCRNCRAGRR
HLCRNTLGVG VNRPGSFAEY LVLPAFNAFK IPDDIPDEIA AIFDPFGNAV HTALSFDLVG
EDVLITGAGP IGVMAAAVAR HVGARNVVVT DVNDYRLDLA RRMGATRAVN VAREDLWEVA
RSELGMTEGF DVGMEMSGSG AAFAQMIRVM NNGGKIAILG IPSGHVDIDW NDVIFKGLTL
KGIYGREMFE TWYKMTALIQ SGLDLTPVLT HRFGIDDYQK GFDAMLGGQS GKVILDWEAG
V
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