| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_0401 |
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| Symbol | |
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| ID | 4057137 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Deinococcus geothermalis DSM 11300 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008025 |
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| Strand | - |
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| Start bp | 406071 |
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| End bp | 408236 |
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| Gene Length | 2166 bp |
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| Protein Length | 721 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641229410 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_603873 |
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| Protein GI | 94984509 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGCAA AGACCTACAC CACGATGCTC GGCGGGCGCG AACTGAGCAT CGAGACGGGC
AAACTGGCAA AGCTCGCCAG CGGCAGCGTC ACCCTGCGCT ACGGCGATAC GCTGTTGCTC
GTCACCGCCC AGGCACGCGA GGAACGCAGC ACCCTGGACT TTCTGCCCCT GACGGTCGAG
TTCGAGGAAC GGCATTACGC GGTCGGGAGG ATTCCCGGCT CCTTCCACCG CCGCGAGGGT
CGGCCCGGCG AACACGCCAT TCTCAGCGCG CGCATCACCG ACCGCCAGAT TCGGCCCCTT
TTCCCCAAAG GGTACCGCCA AGAGACCCAG GTCATCATCA CGGTGCTTTC GGCCGACCAG
CAAAACGCGC CGGACGTGCT CGGGGCCATC GGCGCCTCGG CGGCCCTCAG CCTCAGCGAC
ATTCCCTGGA ACGGGCCGAC CGCCTGCGTG CGCGTCGGGA TGATCGATGG CGAGTATGTG
ATCAACCCCA CCAGCGATCA GCTCACGCGC TCCAGCCTCG ACCTGGTGGT GGCGGGCACC
CGTGACGCCG TCAACATGGT GGAAGCGGGC GCGCAGGGCG TCAGCGAGGA GACGTTGGTG
GGCGCCATCG AGTTCGCGCA CCGCGAGCTG CAGGGCGTGC TGGATCTGAT CGAGACGATG
CGCGCCGAGG TGGGCCGCGA GAAGTTCAAC TTTCTGGTCG ACAGTGACCT CAGCACCGAC
CTGGTGCCCG AGCTGAGCGA GGCGGCGCGG GCGGCGGGGC TGCGGGACGC GCTGCTGACC
ACCAAAAAGC AGGAGCGCAG CGCAAACCTC AAGGCGCTGC GGGACCGCTT GATCGCGGAG
CGCGTGCCGG ATCCGGAAGC TGCGGGAGCG GCGGAGCAGA TTGAAGCGCT CAAGGCGGCC
TTCGCCAAGG TGGAGAAACA GGAGCTGCGC CGCCTGATTC TGCAAGAAGA CCTGCGGGCG
GATGGGCGCA ACTCGAAGAC GGTGCGTCCG ATCTGGATTG AAGCGCGGCC CCTGCCCCGC
GCACACGGCA GCGCGATCTT CACGCGCGGA GAGACGCAAG TGCTGGGCGT CACCACCCTG
GGCACCGAGC GCGACGAGCT GCTGGTGGAC AATCTGACCG GCGAGACGAA TGACCGCTTC
CTGCTGCACT ACAACTTCCC GCCCTACTCG ACCGGCGAGG TCAAGCGGGT GGGCGGGCAG
TCGCGCCGCG AGGTGGGGCA CGGCAACCTC GCCAAGCGGG CCATCCGCGC GGTGCTGCCC
GCCTTCGACG ACTTCCCCTA CGTGATCCGC GTGGTGGGCG AGGTGCTGGA GTCCAACGGC
TCGAGCAGCA TGGCGACCGT CTGCGCCGGC ACCCTCAGTC TGATGGACGC GGGCGTGCCC
ATTCAGGCAC CGGTGGCAGG TGTGGCGATG GGCCTGGTGA TGGAGGGCGA GCAATACCGC
ATCCTGACCG ACATCCTGGG CCTGGAAGAC GCGCTGGGCG ACATGGACTT TAAGGTCTGT
GGCACGGCGG AGGGCGTCAC GGCGTTGCAG ATGGACATCA AGGTGAGCGG CGTAACTCCG
GCGATCATGC GAGAAGCGCT CGCGCAGGCC CGCGAGGCGC GGCTGCACAT CCTAGGCAAG
ATGGCCGAGG TGCTGCCCGC TCCGCGTCCC GAACTCTCCC CCACCGCCCC GCGCATCCTG
ACCCTCAAGA TCAACCCCGA GCTGATCGGC AAGGTGATCG GCCCCGGCGG CAAGCAGGTG
CGCGAGCTGG AGGCCATGGG CGCGCAGGTG ACCATCGAGG AGGACGGCAA CATCCGGATT
TTCAGTGCCG ATGGAGCGGC CGCTGAGGCC GTGCGCCAGA AGATCGAGGG CCTGACCCGC
GAGGCCAAGG TCGGCGAGGA GTACGAGGGC ACCGTGGTCA AGACGGCCCC CTTCGGCGCC
TTTGTTAACC TGTTTCCTGG CCAGGACGGA ATGCTGCACA TCAGCCAGAT GAGCGAGAAC
CGCGTCAACG CCGTTGAGGA CGTGCTGAAC GTGGGCGATC GGCTGCGGGT CAAGATCGCC
AATATCGATG ACCGAGGCAA AATCGATCTG ATTCGCCCGG AGCTGGAGGG CAAGATTGCC
CCCCGTGAAC CACGCGCCGC CCGCGCAGGG GGCGACCGGG GCGGACGTCC GCCGCGGCGG
GAGTAG
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| Protein sequence | MIAKTYTTML GGRELSIETG KLAKLASGSV TLRYGDTLLL VTAQAREERS TLDFLPLTVE
FEERHYAVGR IPGSFHRREG RPGEHAILSA RITDRQIRPL FPKGYRQETQ VIITVLSADQ
QNAPDVLGAI GASAALSLSD IPWNGPTACV RVGMIDGEYV INPTSDQLTR SSLDLVVAGT
RDAVNMVEAG AQGVSEETLV GAIEFAHREL QGVLDLIETM RAEVGREKFN FLVDSDLSTD
LVPELSEAAR AAGLRDALLT TKKQERSANL KALRDRLIAE RVPDPEAAGA AEQIEALKAA
FAKVEKQELR RLILQEDLRA DGRNSKTVRP IWIEARPLPR AHGSAIFTRG ETQVLGVTTL
GTERDELLVD NLTGETNDRF LLHYNFPPYS TGEVKRVGGQ SRREVGHGNL AKRAIRAVLP
AFDDFPYVIR VVGEVLESNG SSSMATVCAG TLSLMDAGVP IQAPVAGVAM GLVMEGEQYR
ILTDILGLED ALGDMDFKVC GTAEGVTALQ MDIKVSGVTP AIMREALAQA REARLHILGK
MAEVLPAPRP ELSPTAPRIL TLKINPELIG KVIGPGGKQV RELEAMGAQV TIEEDGNIRI
FSADGAAAEA VRQKIEGLTR EAKVGEEYEG TVVKTAPFGA FVNLFPGQDG MLHISQMSEN
RVNAVEDVLN VGDRLRVKIA NIDDRGKIDL IRPELEGKIA PREPRAARAG GDRGGRPPRR
E
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