| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_0263 |
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| Symbol | |
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| ID | 4058548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Deinococcus geothermalis DSM 11300 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008025 |
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| Strand | + |
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| Start bp | 252422 |
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| End bp | 255097 |
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| Gene Length | 2676 bp |
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| Protein Length | 891 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641229265 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_603735 |
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| Protein GI | 94984371 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.198237 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.68743 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCACTCT CGATTGCTGA CCGGCGCCTA GGCGCGATTC TGCTTGAGCA GGGGTACGTG
ACCGACACGG ACCTGCAAAA GGCGCTGGTG CGCCATGCCG AGGTGGGTGG TCGCCTGGCG
GATATTCTGA TTGAGTCCGG ACAGGTGGGC GAAAAGCGGA TCGCCCGCGC CATCGAAGAA
GCACTCGGTA TTCCGCTGGT GAACCTCTTG GTGGTCACGC CGGATGCCGC GGCCTTGGCG
GCGATTCGGG CGGAGACGGC CAAGCAGATG CAGGCTTTTC CTTTCGCGCT GGAGGGGCAG
ACCCTGCGGG TGGCGCTGGT GGACCCACTG TCCAGCGTGG CGATCGAGGC GCTGGAAGAC
GACAGTGGCC TGAACATCGA GCCGTATCAG GCCCTGCGCG ATCAGGTGCT GTGGTCTATT
GCGACGTATT ACCCTGAACT CGGACTGATG CCGGTGTTGC CTGAAGGCGC CGCCGGCAGC
TCGGAGAGTG GGGGAAAGCT GGGGCAACGG CTGATCAGTC GGGGCCTGAT CAACGAGGCG
CAGCTGCAGG TCGCGCTCGA TGTCCAGCAG CAGACGGGGG AGGCGCTGGG CCACATCCTG
GTCACGCAGG GCCTGCTCAG CGAGGATCAA CTCTACGAGG TCCTGGCCGA ACAGGCGGGC
GCGGTGTACC TGCGCAACCC CCGCGACTTC CAGCCGGGCG AGGAGGTGCT GGGCAGCCTG
CTGCGCGCCG ATGCTCTCCG CCTCTCGGCG GTGCCGGTGG ACGAAACCGC GCAGGGCGTG
ACGGTCGTCG TGAGTGATCC CCGCCGCCGC GACGAGCTGG AGGCGCTGAT TGGGCGCCCG
GTGCAGCTGG TGCTCGCCCG GCCAGGGGAC GTGGAGGCGC TGATCGAGCG CTACTACCCG
CAGCGGGGCC GCCTGGGCGA GCAGATGGTC CAGCAGGGGA GCCTGTCGCG GGCACAGCTG
CGAGAAGCCC TGCAGGTGCA GGCGCGTGGT GGCAAAGTTA AGCCGCTGGG CGAGGTGATT
GTCGAACTGG GGTTTGCGCG CGCCGAGGAG ATCGATGCGG CCCTCCAGAA GCAGAACGCG
GGCGGGGGCC GCCTGGAAGA CACCCTGGTG CAGTCGGGCA AGCTCAGCCC CGAGATGCTG
GCGCGTTCGC TGGCGGCCCA ACTGGGCTAC GAGTACCTCG ACCCGGTGCA GAATCCACCT
GACCCCCAGG TCGCGCTGAT GATTCCCGAG GCGACGGCGC GGCGCTACAC GGTGGTGCCG
GTGCGCCTGC AGGGTGAGGC GCTCGTCGTC GCGATGAAGG ACCCGCGTAA CGTCTTTGCG
CTCGACGACC TGAAACTCAT CACCGGGCGG GAGATTGTCC CGGCGGTGAT GTCGGAAAAG
GACATCGTCC GCCTGATCGA GCGTTACTTC GGCAACCAGG ACATGGCGAA CCTCAACCAG
CGCCTGGCGG CCGAGAGCAA GACCCGTGAG GCCCGCAAGG AGGCTGACCT CGACTTCTCG
GCGGGACTGG ACGACAACGC TGTCGTGCGG GTGGTGGACA ACCTGATCCG CGAGGCCGCC
TTGCAGGAGG CTTCGGACAT CCACATCGAG CCCACCGAGT CCGCTGTGCG GGTGCGCTAC
CGCGTGGACG GCGCCCTGCG CGAGCAGCCC GAACTTCCCA AGGGAAGCGC CCAGAGCATC
CTGGCCCGTA TCAAGATCAT GGGTGGGCTG GACATCGCAG AAAGGCGCGT GCCGCAAGAC
GGGCGCATCC GCTTCCGCAA GGGCAGCATT GACCTCGACC TGCGTCTCTC GACCCTGCCG
ACCGTCTACG GCGAAAAAGC CGTGATGAGG TTGCTGCAAA AGGCCGAGAA CATTCCGGAA
GTCGAGCAGC TGGGCTTTTC CGAACACAAC TTCGGGCGGT ATCTGGAGGT GATCGAAAAG
CCCAACGGCA TCTTTTTGAT CACCGGGCCG ACAGGTTCGG GCAAGTCGTT TACCTCCTTT
TCTACCCTCA AGCGCATCGC CCGCCCGGAA AAGAACACGA CCACCATCGA GGACCCCATT
GAGTACGAGA TTCCGGGCAT CGTCCAGTCA CAGGTGAATG TTGCGGCGGG CATGACCTTT
GCCCGCGCCC TGCGCGCTTT CCTGCGCCAG GACCCCGACA TTATCTTTGT GGGCGAAATC
CGCGACACCG AGACCGCCAA GATCGCCACC GAGGCAGCGC TGACCGGCCA CCTCGTGCTC
GCGACCCTGC ACACCAACGA CGCGCCCGGC GCAATCACTC GCCTCTCGGA GATGGGCGTC
GAGCACTTCA ACATCTCCGC CTCGGTGGTG GGGGTGCTGG CGCAGCGTCT GGTTCGGCGC
GTTTGCACCG AATGCAAGCA GCCCACCAAC GCCGACCCCG AAGTGCTGCG CCGCCTGGGC
CTGAGCGAAG CCGAGGTGCG CGGCGCAACC CTGATGCGCG GTTCCGGCTG CCCCCGCTGC
GGCGGCACCG GCTACAAGGG CCGGATGGGT ATCCACGAGC TGATGGTGAT TGATGACCCG
CTGCGCCGCG CCATCGCGGC CGGGCGCACT GCCACCGAGC TGCGCGACGT GGCGATGCAG
GAAAGCGGCA TGCGTACCCT GCGCCAAGAC GGCATCGAGA AGGCCCTCGC GGGCCTCACC
ACCCTGGAAG AGGTGTTGGC GGTGACGAGC AGCTAG
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| Protein sequence | MALSIADRRL GAILLEQGYV TDTDLQKALV RHAEVGGRLA DILIESGQVG EKRIARAIEE
ALGIPLVNLL VVTPDAAALA AIRAETAKQM QAFPFALEGQ TLRVALVDPL SSVAIEALED
DSGLNIEPYQ ALRDQVLWSI ATYYPELGLM PVLPEGAAGS SESGGKLGQR LISRGLINEA
QLQVALDVQQ QTGEALGHIL VTQGLLSEDQ LYEVLAEQAG AVYLRNPRDF QPGEEVLGSL
LRADALRLSA VPVDETAQGV TVVVSDPRRR DELEALIGRP VQLVLARPGD VEALIERYYP
QRGRLGEQMV QQGSLSRAQL REALQVQARG GKVKPLGEVI VELGFARAEE IDAALQKQNA
GGGRLEDTLV QSGKLSPEML ARSLAAQLGY EYLDPVQNPP DPQVALMIPE ATARRYTVVP
VRLQGEALVV AMKDPRNVFA LDDLKLITGR EIVPAVMSEK DIVRLIERYF GNQDMANLNQ
RLAAESKTRE ARKEADLDFS AGLDDNAVVR VVDNLIREAA LQEASDIHIE PTESAVRVRY
RVDGALREQP ELPKGSAQSI LARIKIMGGL DIAERRVPQD GRIRFRKGSI DLDLRLSTLP
TVYGEKAVMR LLQKAENIPE VEQLGFSEHN FGRYLEVIEK PNGIFLITGP TGSGKSFTSF
STLKRIARPE KNTTTIEDPI EYEIPGIVQS QVNVAAGMTF ARALRAFLRQ DPDIIFVGEI
RDTETAKIAT EAALTGHLVL ATLHTNDAPG AITRLSEMGV EHFNISASVV GVLAQRLVRR
VCTECKQPTN ADPEVLRRLG LSEAEVRGAT LMRGSGCPRC GGTGYKGRMG IHELMVIDDP
LRRAIAAGRT ATELRDVAMQ ESGMRTLRQD GIEKALAGLT TLEEVLAVTS S
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