Gene Dgeo_0231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_0231 
Symbol 
ID4059139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp217010 
End bp217849 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content69% 
IMG OID641229231 
ProductPSP1 
Protein accessionYP_603703 
Protein GI94984339 
COG category[S] Function unknown 
COG ID[COG1774] Uncharacterized homolog of PSP1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTTGTCC TCCCTGTTCG GTTCGAACGC AGCCCCCGCC TGCACCCGAT GCTCAGCCAG 
GAGCCGTATG CGGTGGGTAC GCGCGTCGTC GTGCAGGGCA AGCGCGGCCC GGAGGTCGCC
ACCGTGCGCG GCGAGGGCAC GGCGCCTGAT CCGCAGGCCC GCTACGGAGC GGTGTTGCGC
GCCGCAGCGC CCGAGGACCT GGCCCGCTGG GACGAACTGT ACCGCCAGGG CGAGGATCTC
AAGTGGCTGC TGCGTGCTCG TGCCCGTGAG CGCGGTCTGC CGGTCAAGAT CGTGGCGGTG
GAATTTACGC TCGACGAGAG CCTGGTCACC GTCAGCTACA GCGCCGAGGA GCGCATCGAA
CTGAACAGCC TGATTGGTGA TCTGCGCGCC CACACCCGCG CCCGGGTGAA CTTCGCGGCG
GTTGGTCCGC GCGAGCAGGC GCAGATGATC GGCGCTTTGG GGGCCTGTGG CCGCGAGAAC
TGCTCCAGCA GCCATCTTCA GGAGTTCGCG CCCGTCAGCA TCCGCATGGC CCGCGACCAG
CAGCTCCCTC TCAACCCGGA GAAGCTTTCG GGACCCTGCG GGCGGCTCCT GTGCTGCCTG
CAATTTGAGC ACACCCAGTA TCTCGAATTG CTGCGCGACC TGCCGCGCAA AAACGCCCGC
GTCTGCCACA CCGGCAGCGG TGCCTGCGGC AAGGTCACCA AGCTCCATCC GCTCGCCGGG
ACGGTGGACG TGCAGACCGA GCAGGGGATT CTGACGAACG TGCCCGCTGC TGAACTTACC
CGTGCCCCTG ACGGAGCAGG GGGCAGGGGA CGGGGGCCGG GCGCCGAAGC GGAAGACTGA
 
Protein sequence
MVVLPVRFER SPRLHPMLSQ EPYAVGTRVV VQGKRGPEVA TVRGEGTAPD PQARYGAVLR 
AAAPEDLARW DELYRQGEDL KWLLRARARE RGLPVKIVAV EFTLDESLVT VSYSAEERIE
LNSLIGDLRA HTRARVNFAA VGPREQAQMI GALGACGREN CSSSHLQEFA PVSIRMARDQ
QLPLNPEKLS GPCGRLLCCL QFEHTQYLEL LRDLPRKNAR VCHTGSGACG KVTKLHPLAG
TVDVQTEQGI LTNVPAAELT RAPDGAGGRG RGPGAEAED