Gene Dgeo_0195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_0195 
Symbol 
ID4058441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp181505 
End bp182173 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content64% 
IMG OID641229195 
Producttwo component transcriptional regulator 
Protein accessionYP_603667 
Protein GI94984303 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.304768 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCAAC GCATCCTCCT TATTGAAGAC AATCCGGACA TCACCCGTGT CGTCCAGTAC 
GAGCTGGAAC AGGCTGGGTA TCGGGTGCTC ACAGCGCCAG ATGGAGTCAC GGGCCTCACC
AGCGCGCGCG AGAACAGCCC GGATCTGGTG ATTCTCGACC TCGGATTGCC CGACTTCGAC
GGCGCTGAGA TCGCCCGCCG CCTGCGCAAG ACCAGCAGCG TCCCCATCAT CATCCTGACC
GCGATGGATG CTGTGGACCG CAAGGTGAAC CTGCTGGAGG CGGGCGCGGA TGACTATATG
ACCAAGCCCT TCCACCCAGA GGAACTGGTG GCCCGCGTCA AGGTGCAGCT CCGGCACCAG
CAGCACGGCG AGGTGATCTC CATCGGCGCG CTGGAAATCC ACCCGCAAAA GCGGCTGTGC
CACTACAACG GCCACGAGGT GCGCCTCTCG CCCAAGGAGT TCGATCTGCT GACCTTCCTG
GCCCGCCAGC CTGGCCGGGT GTACTCACGC CAGGAAATCG AGCGCGAGGT CTGGAACGGC
GAACTGCCCA GCAACTCGAA CGTGGTGGAC GTGCATATGG CCAATATGCG CGCCAAGCTG
CGCGATCTCG ACGGCTACGG GATCATCCGG ACCGTGCGCG GCATCGGGTA CGCGCTCAAG
ACGCCCTGA
 
Protein sequence
MDQRILLIED NPDITRVVQY ELEQAGYRVL TAPDGVTGLT SARENSPDLV ILDLGLPDFD 
GAEIARRLRK TSSVPIIILT AMDAVDRKVN LLEAGADDYM TKPFHPEELV ARVKVQLRHQ
QHGEVISIGA LEIHPQKRLC HYNGHEVRLS PKEFDLLTFL ARQPGRVYSR QEIEREVWNG
ELPSNSNVVD VHMANMRAKL RDLDGYGIIR TVRGIGYALK TP