Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dgeo_0156 |
Symbol | |
ID | 4057356 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Deinococcus geothermalis DSM 11300 |
Kingdom | Bacteria |
Replicon accession | NC_008025 |
Strand | + |
Start bp | 145359 |
End bp | 146816 |
Gene Length | 1458 bp |
Protein Length | 485 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641229153 |
Product | beta-lactamase-like protein |
Protein accession | YP_603628 |
Protein GI | 94984264 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.215691 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGTCG AGAGTCTAGG GGCGGCCCTG ACCGTCACGG GAAGCGCGCA CCTGCTATCC ACCCACTCCG GCCCGGTGCT GATTGATTGC GGTCTCTTCC AGGGCGGCGA GGAGCTGGAA GCCCGCAACC GCGAACCCTT TCCCTTTGCG GCTCCTGACC TGCTGGCGGT TCTTGTGACG CACGCACATC TCGACCACAT CGGGCGACTC CCGCTGCTGG TGAGACGTGG CTATCGCGGT CCGATCTACT GCACCCCCCC GACGGCAGCC CTGGCCGAGG CAGTGCTGCT CGACTCGGCC CGCCTCCAGG TCGAGGGCTT TCGCCAGGAC CTCCGCAAGG CCCGGCGGAT CGGCCGCGAA GCCGACGTTC TCGAACCCCT CTACGACGAG GAGGACGTGC ACCGCACCCT CGCCCTGCTG CGGCCTACCC TGCACTACGG GGAGACGACG CGGGTGGGGC CGCTGCGCGT GACGTCCCAG CGGGCCGGGC ACATTCTGGG CAGCGCCTAC CTGGTGATCG AGGGGGAAGG CCAGCGGCTG CTGATGTCGG GCGACCTGGG AAACCGCGAG AGCGGCCTGC AACTCGTCTT TACGCCGCCG CCGCCGGTCG ACGCGGTGAT GCTTGAGACG ACCTACGCCA ACCGCACCCA CCGCTCGCGT GCGGCGACGC TGGCTGAATT TCGCGACATC CTGCACCAGA GTATCCGTGC GGGCGGCAAG ATTCTGATTC CCACCTTTGC CATCGAGCGC GCGCAGATGA TCCTGTACAT CCTGCGCGAC ATGATGGCCG CGGGCGAGGT GCCGCGCATC CCCGTCTTCC TCGATTCCCC GCTCGCCACC CGCGCGACCG CCGATTACTT CGAATTCGGG GAAGAATTGA TTCCGCCTGT CCGCACGGCC ATTCAGAATG GCGAAGATCC CTTCCATCCC TCGACGCTGC ATGTCGTGCC CACCAGCGCC GAATCCCAGC GCATCAACCG CTACGACGGC CCCGCCATCA TCATCGCGGG CAACGGGATG ATGAACGGCG GACGCATCCA GCACCACCTC AAGCACAACC TCTGGAAGCC CAGCACCAGC CTGGTGATCG TGAGCTACCA GTCGCCCGGC AGCCTGGGCG GACGAATCTT GGCGGGCCAG AGTCCCGTCC GCATTCTGGG CGAGGAGGTG ATCGTCCGTG CCCAGGTCCA CACCATCGGC GGCTTCTCTG CCCACGCCGA TCAGGACGAC CTGCTCACTT TCCTGGCAGA CACCGGCAAC CCACGCGTTT GGCTGATTCA CGGCGAGGTG CCCGTCATGG AGGAATTCCT CCCCGTCCTC GCCCAGCGCG GCCTGACCGC CAACATCATG CCCGACCACC AGGCGGTGGA CCTCTTGACC ACCACCTTTC CTGCGGGGCG CCCCCCCGGT CTTCCTGAGG GGGGAGAAGA TGCGCGGGCC AGCGCGGGCG GCGAGTAG
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Protein sequence | MQVESLGAAL TVTGSAHLLS THSGPVLIDC GLFQGGEELE ARNREPFPFA APDLLAVLVT HAHLDHIGRL PLLVRRGYRG PIYCTPPTAA LAEAVLLDSA RLQVEGFRQD LRKARRIGRE ADVLEPLYDE EDVHRTLALL RPTLHYGETT RVGPLRVTSQ RAGHILGSAY LVIEGEGQRL LMSGDLGNRE SGLQLVFTPP PPVDAVMLET TYANRTHRSR AATLAEFRDI LHQSIRAGGK ILIPTFAIER AQMILYILRD MMAAGEVPRI PVFLDSPLAT RATADYFEFG EELIPPVRTA IQNGEDPFHP STLHVVPTSA ESQRINRYDG PAIIIAGNGM MNGGRIQHHL KHNLWKPSTS LVIVSYQSPG SLGGRILAGQ SPVRILGEEV IVRAQVHTIG GFSAHADQDD LLTFLADTGN PRVWLIHGEV PVMEEFLPVL AQRGLTANIM PDHQAVDLLT TTFPAGRPPG LPEGGEDARA SAGGE
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