Gene Dgeo_0156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_0156 
Symbol 
ID4057356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp145359 
End bp146816 
Gene Length1458 bp 
Protein Length485 aa 
Translation table11 
GC content67% 
IMG OID641229153 
Productbeta-lactamase-like protein 
Protein accessionYP_603628 
Protein GI94984264 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.215691 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGTCG AGAGTCTAGG GGCGGCCCTG ACCGTCACGG GAAGCGCGCA CCTGCTATCC 
ACCCACTCCG GCCCGGTGCT GATTGATTGC GGTCTCTTCC AGGGCGGCGA GGAGCTGGAA
GCCCGCAACC GCGAACCCTT TCCCTTTGCG GCTCCTGACC TGCTGGCGGT TCTTGTGACG
CACGCACATC TCGACCACAT CGGGCGACTC CCGCTGCTGG TGAGACGTGG CTATCGCGGT
CCGATCTACT GCACCCCCCC GACGGCAGCC CTGGCCGAGG CAGTGCTGCT CGACTCGGCC
CGCCTCCAGG TCGAGGGCTT TCGCCAGGAC CTCCGCAAGG CCCGGCGGAT CGGCCGCGAA
GCCGACGTTC TCGAACCCCT CTACGACGAG GAGGACGTGC ACCGCACCCT CGCCCTGCTG
CGGCCTACCC TGCACTACGG GGAGACGACG CGGGTGGGGC CGCTGCGCGT GACGTCCCAG
CGGGCCGGGC ACATTCTGGG CAGCGCCTAC CTGGTGATCG AGGGGGAAGG CCAGCGGCTG
CTGATGTCGG GCGACCTGGG AAACCGCGAG AGCGGCCTGC AACTCGTCTT TACGCCGCCG
CCGCCGGTCG ACGCGGTGAT GCTTGAGACG ACCTACGCCA ACCGCACCCA CCGCTCGCGT
GCGGCGACGC TGGCTGAATT TCGCGACATC CTGCACCAGA GTATCCGTGC GGGCGGCAAG
ATTCTGATTC CCACCTTTGC CATCGAGCGC GCGCAGATGA TCCTGTACAT CCTGCGCGAC
ATGATGGCCG CGGGCGAGGT GCCGCGCATC CCCGTCTTCC TCGATTCCCC GCTCGCCACC
CGCGCGACCG CCGATTACTT CGAATTCGGG GAAGAATTGA TTCCGCCTGT CCGCACGGCC
ATTCAGAATG GCGAAGATCC CTTCCATCCC TCGACGCTGC ATGTCGTGCC CACCAGCGCC
GAATCCCAGC GCATCAACCG CTACGACGGC CCCGCCATCA TCATCGCGGG CAACGGGATG
ATGAACGGCG GACGCATCCA GCACCACCTC AAGCACAACC TCTGGAAGCC CAGCACCAGC
CTGGTGATCG TGAGCTACCA GTCGCCCGGC AGCCTGGGCG GACGAATCTT GGCGGGCCAG
AGTCCCGTCC GCATTCTGGG CGAGGAGGTG ATCGTCCGTG CCCAGGTCCA CACCATCGGC
GGCTTCTCTG CCCACGCCGA TCAGGACGAC CTGCTCACTT TCCTGGCAGA CACCGGCAAC
CCACGCGTTT GGCTGATTCA CGGCGAGGTG CCCGTCATGG AGGAATTCCT CCCCGTCCTC
GCCCAGCGCG GCCTGACCGC CAACATCATG CCCGACCACC AGGCGGTGGA CCTCTTGACC
ACCACCTTTC CTGCGGGGCG CCCCCCCGGT CTTCCTGAGG GGGGAGAAGA TGCGCGGGCC
AGCGCGGGCG GCGAGTAG
 
Protein sequence
MQVESLGAAL TVTGSAHLLS THSGPVLIDC GLFQGGEELE ARNREPFPFA APDLLAVLVT 
HAHLDHIGRL PLLVRRGYRG PIYCTPPTAA LAEAVLLDSA RLQVEGFRQD LRKARRIGRE
ADVLEPLYDE EDVHRTLALL RPTLHYGETT RVGPLRVTSQ RAGHILGSAY LVIEGEGQRL
LMSGDLGNRE SGLQLVFTPP PPVDAVMLET TYANRTHRSR AATLAEFRDI LHQSIRAGGK
ILIPTFAIER AQMILYILRD MMAAGEVPRI PVFLDSPLAT RATADYFEFG EELIPPVRTA
IQNGEDPFHP STLHVVPTSA ESQRINRYDG PAIIIAGNGM MNGGRIQHHL KHNLWKPSTS
LVIVSYQSPG SLGGRILAGQ SPVRILGEEV IVRAQVHTIG GFSAHADQDD LLTFLADTGN
PRVWLIHGEV PVMEEFLPVL AQRGLTANIM PDHQAVDLLT TTFPAGRPPG LPEGGEDARA
SAGGE