Gene Dgeo_0133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_0133 
Symbol 
ID4057333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp121896 
End bp122510 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content70% 
IMG OID641229130 
Productmetal dependent phosphohydrolase 
Protein accessionYP_603605 
Protein GI94984241 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1713] Predicted HD superfamily hydrolase involved in NAD metabolism 
TIGRFAM ID[TIGR00277] uncharacterized domain HDIG
[TIGR00488] putative HD superfamily hydrolase of NAD metabolism 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.19839 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCCG AGCCGCCCAA CCTCCGGCAC CCGCTGGCCG AACTGGCCGG CTGGGAAGAA 
CGGGTGCGGC TGATGGTCCG TCCGCGCCGC TTTGAACACG TGCTGCGGGT GGCCGAACTT
GCCTGTCAGA TCGCGCGCGC CAACGGTCTG GACGAGGCAC GGGCCTATGC CGCAGGGCTG
CTGCACGACA TCGCCCGCGA CTTGCCGGAC GCCGAGCTGC TGCGCCTTGC GCCGCCCGAG
TGTGCGATTG ACGCCGCGCA TCCGCTCGCG CTGCATGGCC GGGCCGCCCG CACGCTGCTC
GAGCGCTGGG GCTACAGTGA TTCGGTGGTG CTTGAAGCCG TCGAGGACCA TACCACCGGC
CCGCGCGGTG GCAATCCGGT GGCGGCCTGT GTCTATGTCG CAGACGTGTC CGAACCTGGG
CGCGGCGTGA ACGAGGACAT CCGTGAGCTG GCGCTGCGCG ACCTGAACGC CGCCCTCAAC
CGCGCCATCG TTTCCAAAGT GACCTACCTC CAGGGGCGCG GCATTCAGGT GCATCCCCGC
ACCTTGCTCG CCTATCATGC CCTGCCGTGC GTCACGCCGG CTGCCGCGGC CCCTGACTCT
CCCCTGCCGC CATGA
 
Protein sequence
MIAEPPNLRH PLAELAGWEE RVRLMVRPRR FEHVLRVAEL ACQIARANGL DEARAYAAGL 
LHDIARDLPD AELLRLAPPE CAIDAAHPLA LHGRAARTLL ERWGYSDSVV LEAVEDHTTG
PRGGNPVAAC VYVADVSEPG RGVNEDIREL ALRDLNAALN RAIVSKVTYL QGRGIQVHPR
TLLAYHALPC VTPAAAAPDS PLPP