| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_0060 |
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| Symbol | |
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| ID | 4058501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Deinococcus geothermalis DSM 11300 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008025 |
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| Strand | + |
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| Start bp | 58462 |
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| End bp | 59178 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641229056 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_603532 |
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| Protein GI | 94984168 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1877] Trehalose-6-phosphatase |
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| TIGRFAM ID | [TIGR00685] trehalose-phosphatase
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCCTC CTCCTGAACT CCTTTCGCTG GGGGAGCGCG CCCTGCTTGT CCTCTGCGAC
TATGACGGCA CACTCGCCCC CATCGTTCCC CGGCCCGAAG ACGCCTTTCC GGAGCCGGGT
GCCCGCGAGG CCCTCGGGCG CCTGATCGCC CATCCCGCCC ATCACGTTGC CGTCGTCACA
GGCCGCCGCG CCGAACAGGT GCGCGCCTTT CTGGACCTGC CGGACCTGCC GGTGGTTGGC
TTGCACGGAA TGGAATGGCC CGGCGAGGCG CTGCGTCCCC CCGACGAGGA CGCCCTGCGC
CTCATCGCTG CGCAGCTGCC CGACCTGCCG GGTCTGCGGC TGGAGGACAA GCGCTGGACG
CTGGCCGTTC ACTACCGCGC GGTGCCCGAA AACCAGCAGG CGGACGTGGA AGCCGCCCTG
GCCGCCGTGA CCCTGCCGGC GGGCTGGGAG GTGATCGCCG GCAAGAAGGT CCGGGAGTTC
CGCCCCGCCG GATTCGGCAA GGGCCGCGCC GCGCAGCAGC TCGCCCTGAC CTTCCCGCTG
CACCTGCCGG TGTTTTTGGG GGACGACGTG ACCGACGAGG AGGGCTTTGT GGCGCTGCGC
GAGCAGGGCG GCGTGACGGT GAAGGTGGGG GAGGGCGCGA CCGCCGCCGA GTACCGGGTG
GCCGGCCCGG CGGAGGTGGT CACACTGCTG CGGACCTGGG CCGACATGCT CGGCTGA
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| Protein sequence | MTPPPELLSL GERALLVLCD YDGTLAPIVP RPEDAFPEPG AREALGRLIA HPAHHVAVVT
GRRAEQVRAF LDLPDLPVVG LHGMEWPGEA LRPPDEDALR LIAAQLPDLP GLRLEDKRWT
LAVHYRAVPE NQQADVEAAL AAVTLPAGWE VIAGKKVREF RPAGFGKGRA AQQLALTFPL
HLPVFLGDDV TDEEGFVALR EQGGVTVKVG EGATAAEYRV AGPAEVVTLL RTWADMLG
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