Gene Dgeo_0016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_0016 
Symbol 
ID4058731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp15559 
End bp16119 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content66% 
IMG OID641229013 
Productcytochrome c oxidase, subunit II 
Protein accessionYP_603489 
Protein GI94984125 
COG category[C] Energy production and conversion 
COG ID[COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAACT CTCCACGGCC CCCCGGCAAC CCGATTCCCC GTCTGGAACA TCACACCCTC 
GAACGCTACG AGAGCGTCTG GCTGGGCATC GCGGCAGTGA TGGCCGTCCT GCTGTTCGCG
AGCACCCTGG CCAGTTTCAT CAGCGGGACC TACCCGGCGC TCCGGGGTGA GGGCGGGCAC
CACATCAGCG GCGTCACCAA TGGGCGCCTC GATCCCAGGA ACATCGCCGC GACACCCTTT
GCCCAACCCG GCCTGCGCGA AAACCCCGAC GGGAGCCTGG AAGCTTTTGT GGTCGCCAAG
GCCTTTGCCT TTGAACCCGC GGTGCTGCGC GTTCCCGCAG GCCGCCCGGT CACCTTCCAC
GTCACCTCGG CCGATGTGAT GCACGGGTAC GAGGTGGCGG GCACCAACAT CAATGTGACC
GCGATTCCTG GGCAGGTGAC GAGCTTCTCC ACCACCTTCC GCCAGCCCGG CACCCACACC
ACCCTCTGCA ACGAGTACTG CGGGATCGGC CACCACAACA TGATCAACCG CGTCGTGGTG
GAAGCCCCTC AGGCCCCCTA G
 
Protein sequence
MTNSPRPPGN PIPRLEHHTL ERYESVWLGI AAVMAVLLFA STLASFISGT YPALRGEGGH 
HISGVTNGRL DPRNIAATPF AQPGLRENPD GSLEAFVVAK AFAFEPAVLR VPAGRPVTFH
VTSADVMHGY EVAGTNINVT AIPGQVTSFS TTFRQPGTHT TLCNEYCGIG HHNMINRVVV
EAPQAP