Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dgeo_2692 |
Symbol | |
ID | 4073923 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Deinococcus geothermalis DSM 11300 |
Kingdom | Bacteria |
Replicon accession | NC_008010 |
Strand | + |
Start bp | 336928 |
End bp | 338139 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641228784 |
Product | xylose isomerase |
Protein accession | YP_594199 |
Protein GI | 94972159 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2115] Xylose isomerase |
TIGRFAM ID | [TIGR02631] xylose isomerase, Arthrobacter type |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTGATT ACACCCCCAC GCCGGCTGAC AAATTCACCT TCGGCCTCTG GACGGTCGGC CAAACCGGGC GCGACCCCTT CGGTGAGGCG ACCCGTCCGG GCTTCTCCGC CCCGTACATC GTCCAGAAGC TCGCCGAACT CGGCGCGTAC GGCGTCAACC TGCATGACAA CGATCTGGTC CCAATCGATG CCACCCCGCA ACAACGGGAC CGCATCGTGG CCGAGTTCAA GCAAGCGCTG TCCGATCATG GCCTCGTCGT ACCAATGGCA ACCACCAATC TGTTCACCGA CCCTGTCTTC AAAGACGGCG CCTTCACCTC CGCCGACGCG CGGGTGCGGG CCTACGCCCT GCAAAAGACG ATGCAGAGCA TGGACCTTGG CCACGAACTG GGGGCGCAGA CCTACGTCTT CTGGGGCGGG CGCGAGGGCA CCGAGGTGGA TGCCAGCAGC AAACTGCTCG ATGCGCTCGC CTGGTTCCGC GACAGCCTCA ACTTCCTCGC GGAGTACAGC CAGAGTCAGG GGTACGGCTA CCGCTTCGCA CTGGAACCTA AACCCAACGA GCCTCGAGGC GACATCTTCT TTCCTACGGC AGGCTCCATG CTGGGCTTTA TCGCCACCCT CGATCAACCG GACCTTTTCG GAGTGAACCC CGAGTTCGCG CACGACACGA TGGCGGGATT GAACTTCACC CACGCCGTCG CACAGGTGAT TGACGCCGGG AAGCTGTTCC ACATCGACCT GAATGACCAG AAGATGGGCC GCTTCGACCA GGATCTGCGC TTTGGGGCGG AGAACCTCAA GACTGCCTTC TTCCTGGTCA AGCTGCTGGA GGACAGCGGC TACGACGGTC CGCGCCACTT CGACGCCCAC GCCCTGCGCA CTGAGGACGA AGAAGGGGTA TGGGCGTTTG CCCGTGGGTG TATGCGGACC TACCTGATCC TGAAGGAGAA AGCGCAGCAA TTTGACGAGG ACCCGGAGAT TCAGGCGGCC CTCGCAGCAT ATCGCGTGGA CGACGAGGAA CTCTCGCGCC TCACCGCGAA GTTCAGCCCG GAGAACGCCA AGGCACTCAA GGCGCGGACC TTCGACCGGG AGTTGTTGGG CCGACGTGGG CCAGGTCTCG AGCAGCTCGA CCAGCTCACG GTGGAGCTGC TGCTGGGGCT GCGCGGCCAC ACGTCCACGA CGACTCATCC AGAGATCGAG GTCACGAGGT GA
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Protein sequence | MPDYTPTPAD KFTFGLWTVG QTGRDPFGEA TRPGFSAPYI VQKLAELGAY GVNLHDNDLV PIDATPQQRD RIVAEFKQAL SDHGLVVPMA TTNLFTDPVF KDGAFTSADA RVRAYALQKT MQSMDLGHEL GAQTYVFWGG REGTEVDASS KLLDALAWFR DSLNFLAEYS QSQGYGYRFA LEPKPNEPRG DIFFPTAGSM LGFIATLDQP DLFGVNPEFA HDTMAGLNFT HAVAQVIDAG KLFHIDLNDQ KMGRFDQDLR FGAENLKTAF FLVKLLEDSG YDGPRHFDAH ALRTEDEEGV WAFARGCMRT YLILKEKAQQ FDEDPEIQAA LAAYRVDDEE LSRLTAKFSP ENAKALKART FDRELLGRRG PGLEQLDQLT VELLLGLRGH TSTTTHPEIE VTR
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